RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 RGS8P57771 180 aaPredicted RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 PDCD1Q15116 288 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 TAF9Q16594 264 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 GTDC1Q4AE62 458 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 TMEM155Q4W5P6 130 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 SPRNQ5BIV9 151 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 PABPC1L2AQ5JQF8 200 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 FAM91A1Q658Y4 838 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 RHOUQ7L0Q8 258 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 ZNF101Q8IZC7 436 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 ABHD4Q8TB40 342 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 KLF14Q8TD94 323 aaPredicted RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 SLC25A44Q96H78 314 aaPredicted RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 SSBP3Q9BWW4 388 aaPredicted RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 TCF7L1Q9HCS4 588 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 IL20RAQ9UHF4 553 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 LRCH1Q9Y2L9 728 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 POLR3KQ9Y2Y1 108 aaPredicted RBP9.81□□□□□ -0.84
CDK9-205ENST00000498339 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
CDK9-205ENST00000498339 C3orf80F5H4A9 247 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 PIN1P1O15428 100 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 ERLIN1O75477 346 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 NDUFA7O95182 113 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 PLATP00750 562 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 IGHG1P01857 330 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 SERPINE1P05121 402 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 NUDT7P0C024 238 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 TNFRSF1AP19438 455 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 PRKAR1BP31321 381 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 GDI2P50395 445 aaKnown RBP9.8□□□□□ -0.84
CDK9-205ENST00000498339 GNB2P62879 340 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 RELBQ01201 579 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 PAX8Q06710 450 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 IFFO1Q0D2I5 559 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 ZMYND11Q15326 602 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 TAF11Q15544 211 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 OR1Q1Q15612 314 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 TMEM255AQ5JRV8 349 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 GPR157Q5UAW9 335 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 MBNL2Q5VZF2 373 aaKnown RBP9.8□□□□□ -0.84
CDK9-205ENST00000498339 LRRN1Q6UXK5 716 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 RFPL4BQ6ZWI9 263 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 OR2Z1Q8NG97 314 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 OR10S1Q8NGN2 331 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 VPS33AQ96AX1 596 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 UPRTQ96BW1 309 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 THOC1Q96FV9 657 aaKnown RBP9.8□□□□□ -0.84
CDK9-205ENST00000498339 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
CDK9-205ENST00000498339 ARHGDIGQ99819 225 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 CHIAQ9BZP6 476 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 RMND5AQ9H871 391 aa9.8□□□□□ -0.84
CDK9-205ENST00000498339 RYR3Q15413 4870 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 A0A0B4J2E0 115 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 IGHV2-70DA0A0C4DH43 119 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 A0A1B0GX12 115 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 CEACAM18A8MTB9 384 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MCIDASD6RGH6 385 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 F5H0A9 414 aaPredicted RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 IL6P05231 212 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 CD55P08174 381 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 PGA4P0DJD7 388 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 PGA3P0DJD8 388 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 PPIAL4GP0DN37 164 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 UMPSP11172 480 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 SELEP16581 610 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MDH2P40926 338 aaKnown RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 WNT5AP41221 380 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 SLC1A6P48664 564 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 ARHGDIAP52565 204 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 PPP1CBP62140 327 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 TTMPQ5BVD1 217 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MTX3Q5HYI7 312 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 FAM205BPQ63HN1 556 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 LRFN4Q6PJG9 635 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 NHLRC1Q6VVB1 395 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 COMTD1Q86VU5 262 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 RANBP3LQ86VV4 465 aaPredicted RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 LRRC28Q86X40 367 aaPredicted RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 KRT73Q86Y46 540 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MUC20Q8N307 709 aaPredicted RBP9.79□□□□□ -0.84
CDK9-205ENST00000498339 ZNF283Q8N7M2 679 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 NOXO1Q8NFA2 376 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 AKR7LQ8NHP1 331 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 NFKBIDQ8NI38 313 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MCHR2Q969V1 340 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 ITCHQ96J02 903 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 ZNF347Q96SE7 839 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 SPATA5L1Q9BVQ7 753 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 RAD21L1Q9H4I0 556 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 MEAF6Q9HAF1 191 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 BCL2L10Q9HD36 194 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 A4GALTQ9NPC4 353 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 ASH2LQ9UBL3 628 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms