RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 C1orf21Q9H246 121 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 IKZF5Q9H5V7 419 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 ZCCHC3Q9NUD5 404 aaKnown RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 ZNF701Q9NV72 531 aaPredicted RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 DDX18Q9NVP1 670 aaKnown RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 CMTM6Q9NX76 183 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 PRODH2Q9UF12 536 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 DKKL1Q9UK85 242 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 KCNE3Q9Y6H6 103 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 USF3Q68DE3 2245 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 MED12LQ86YW9 2145 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ROS1P08922 2347 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 TTC36A6NLP5 189 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 RNF212BA8MTL3 300 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 FXYD1O00168 92 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 NME4O00746 187 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 HNRNPCL1O60812 293 aaKnown RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 BCAS2O75934 225 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 NDUFB4O95168 129 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 SPARCP09486 303 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 CT45A8P0DMV1 189 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 CT45A9P0DMV2 189 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 OR12D1P0DN82 309 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 GPX2P18283 190 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 TCN1P20061 433 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 TBXA2RP21731 343 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 PPIBP23284 216 aaKnown RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 GABRA3P34903 492 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 PDLIM4P50479 330 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 SLC7A2P52569 658 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ATP5J2P56134 94 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 DSCR4P56555 118 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 EGR4Q05215 589 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 LIPEQ05469 1076 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 CEACAM7Q14002 265 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 LASP1Q14847 261 aaKnown RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 GUSBP1Q15486 140 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 TBCEQ15813 527 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 EXOC3L2Q2M3D2 409 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 DNAL1Q4LDG9 190 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ZNF585BQ52M93 769 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 CT45A2Q5DJT8 189 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 SAXO2Q658L1 398 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 C8orf82Q6P1X6 216 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 TNFAIP8L2Q6P589 184 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 BHLHB9Q6PI77 547 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 NPSR1Q6W5P4 371 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ZNF704Q6ZNC4 412 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 HAPLN4Q86UW8 402 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 PHC2Q8IXK0 858 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 PGAM4Q8N0Y7 254 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 C10orf111Q8N326 155 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 OR2L13Q8N349 312 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 FBXO30Q8TB52 745 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 FNDC9Q8TBE3 224 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 SFXN5Q8TD22 340 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 GPR151Q8TDV0 419 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ADAMTS15Q8TE58 950 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 MCUR1Q96AQ8 359 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 MOAP1Q96BY2 351 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 NEURL3Q96EH8 262 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 GIMAP5Q96F15 307 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 MED30Q96HR3 178 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 SLC35G5Q96KT7 338 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ZNF583Q96ND8 569 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 OR7D2Q96RA2 312 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 PINK1Q9BXM7 581 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 OR51I1Q9H343 314 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 DSN1Q9H410 356 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 RAD21L1Q9H4I0 556 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 RNF122Q9H9V4 155 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 FOLH1BQ9HBA9 442 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 NDE1Q9NXR1 346 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 MED11Q9P086 117 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 TMEM181Q9P2C4 612 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 FAF1Q9UNN5 650 aaPredicted RBP5.63□□□□□ -1.51
VIM-207ENST00000495528 PROCRQ9UNN8 238 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ZNF337Q9Y3M9 751 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 ATRQ13535 2644 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 DSCAMO60469 2012 aa5.63□□□□□ -1.51
VIM-207ENST00000495528 DUXAA6NLW8 204 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 USP17L23D6RBM5 183 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 HMGN4O00479 90 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 HSPA12AO43301 675 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 PDE5AO76074 875 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 AQP8O94778 261 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ALOX5P09917 674 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 NR2F1P10589 423 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ACP2P11117 423 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ME2P23368 584 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 GSK3BP49841 420 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 GZMMP51124 257 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 PNLIPRP2P54317 469 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CLDN20P56880 219 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 DSTNP60981 165 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 DMTNQ08495 405 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 FGFBP1Q14512 234 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 PON3Q15166 354 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms