RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	ASAH2B	P0C7U1	165 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC6A2	P23975	617 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	STOM	P27105	288 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	APLNR	P35414	380 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	CLRN1	P58418	232 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	SEC61A1	P61619	476 aa	Known RBP	11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	PLP2	Q04941	152 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	MOG	Q16653	247 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	FAM209A	Q5JX71	171 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	ENTPD8	Q5MY95	495 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	BLOC1S3	Q6QNY0	202 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	RBMS3	Q6XE24	437 aa	Known RBP	11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	DPPA2	Q7Z7J5	298 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	AKR7L	Q8NHP1	331 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC25A40	Q8TBP6	338 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	POM121L2	Q96KW2	1035 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	DCLRE1C	Q96SD1	692 aa	Known RBP	11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	MRPL13	Q9BYD1	178 aa	Known RBP	11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	OR2J1	Q9GZK6	312 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	LRMDA	Q9H2I8	198 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	TMEM38A	Q9H6F2	299 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	NANS	Q9NR45	359 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	PURG	Q9UJV8	347 aa	Known RBP	11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC13A4	Q9UKG4	626 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	NUP50	Q9UKX7	468 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC7A7	Q9UM01	511 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGKV1D-43	A0A0B4J1Z2	117 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	C5orf49	A4QMS7	147 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	BLOC1S5-TXNDC5	H3BN57	136 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	MGRN1	O60291	552 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ENTPD5	O75356	428 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	SERPINB7	O75635	380 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC2A10	O95528	541 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	NGF	P01138	241 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	PTH	P01270	115 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGHV2-70	P01814	119 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGHG1	P01857	330 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	MT-ND5	P03915	603 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	SBK2	P0C263	348 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF32	P17041	273 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	GPX2	P18283	190 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	HSF2	Q03933	536 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF154	Q13106	437 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	BAMBI	Q13145	260 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF718	Q3SXZ3	478 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	MIDN	Q504T8	468 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ARMCX4	Q5H9R4	360 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	TTC33	Q6PID6	262 aa	Predicted RBP	11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	EPGN	Q6UW88	154 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	RFPL4B	Q6ZWI9	263 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	JAZF1	Q86VZ6	243 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	PTOV1	Q86YD1	416 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	HIPK4	Q8NE63	616 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	NOXO1	Q8NFA2	376 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	KLF14	Q8TD94	323 aa	Predicted RBP	11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ST7L	Q8TDW4	575 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ADAMTS16	Q8TE57	1224 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	NABP1	Q96AH0	204 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	SEPHS2	Q99611	448 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	MSL2	Q9HCI7	577 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLCO1B3	Q9NPD5	702 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	CCDC167	Q9P0B6	97 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	EGFL7	Q9UHF1	273 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	KLHL21	Q9UJP4	597 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF229	Q9UJW7	825 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	UGT2A1	Q9Y4X1	527 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	AUP1	Q9Y679	476 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	GMEB1	Q9Y692	573 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	USH1C	Q9Y6N9	552 aa		11.56	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPIAL4E	A0A075B759	164 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGHV3OR16-10	A0A075B7F0	116 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPIAL4C	A0A0B4J2A2	164 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPIAL4D	F5H284	164 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161		M0QX08	132 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	FMO6P	O60774	539 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	TRMU	O75648	421 aa	Known RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPIAL4F	P0DN26	164 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	UMPS	P11172	480 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	GCH1	P30793	250 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	ATP4B	P51164	291 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF84	P51523	738 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	UGT2B15	P54855	530 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PCBP3	P57721	371 aa	Known RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	FMOD	Q06828	376 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	RPL18	Q07020	188 aa	Known RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	NRN1L	Q496H8	165 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	MBNL2	Q5VZF2	373 aa	Known RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	TREML1	Q86YW5	311 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	ASB10	Q8WXI3	467 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	POP5	Q969H6	163 aa	Known RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	SPDL1	Q96EA4	605 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PRSS27	Q9BQR3	290 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF426	Q9BUY5	554 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PARD6B	Q9BYG5	372 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	MEPE	Q9NQ76	525 aa	Predicted RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PLEK2	Q9NYT0	353 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	NPTN	Q9Y639	398 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms