RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 COPS3Q9UNS2 423 aa4.18□□□□□ -1.74
SND1-216ENST00000492840 SAMD4AQ9UPU9 718 aaKnown RBP4.18□□□□□ -1.74
SND1-216ENST00000492840 MRPS28Q9Y2Q9 187 aaKnown RBP4.18□□□□□ -1.74
SND1-216ENST00000492840 KCNIP3Q9Y2W7 256 aa4.18□□□□□ -1.74
SND1-216ENST00000492840 L3MBTL1Q9Y468 752 aa4.18□□□□□ -1.74
SND1-216ENST00000492840 AUP1Q9Y679 476 aa4.18□□□□□ -1.74
SND1-216ENST00000492840 PLXND1Q9Y4D7 1925 aa4.18□□□□□ -1.74
SND1-216ENST00000492840 NID2Q14112 1375 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 CELSR3Q9NYQ7 3312 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 LOC100131303A0A0U1RQF7 123 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SMCO2A6NFE2 343 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 CCT8L1PA6NM43 557 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 E7ESA3 106 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 GFYI3L273 518 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 CHMP2AO43633 222 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 ZFAND5O76080 213 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OR7A10O76100 309 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OXSR1O95747 527 aaPredicted RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 GNA14O95837 355 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 MBP02144 154 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SERPINE2P07093 398 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 ANXA5P08758 320 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 ZNF10P21506 573 aaPredicted RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 DCKP27707 260 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 HSD17B2P37059 387 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 VHLP40337 213 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 RIDAP52758 137 aaKnown RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 TMEM50BP56557 158 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SEMG2Q02383 582 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 FCHO2Q0JRZ9 810 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SELENBP1Q13228 472 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 DMC1Q14565 340 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 PSMD5Q16401 504 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 DGUOKQ16854 277 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 C9orf135Q5VTT2 229 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 MLIPQ5VWP3 458 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OR52W1Q6IF63 320 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 CLEC18BQ6UXF7 455 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SLC16A14Q7RTX9 510 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 MMAAQ8IVH4 418 aaKnown RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 LKAAEAR1Q8TD35 194 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 SETD7Q8WTS6 366 aaKnown RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 TCTEX1D2Q8WW35 142 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 HTR3CQ8WXA8 447 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OR1E3Q8WZA6 343 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 NR4A3Q92570 626 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 B3GALT6Q96L58 329 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OXGR1Q96P68 337 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 F2RL3Q96RI0 385 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 MCHR1Q99705 422 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 GAL3ST1Q99999 423 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 OR2AG1Q9H205 316 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 BOLA2Q9H3K6 86 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 RBKSQ9H477 322 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 AMBNQ9NP70 447 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 NANSQ9NR45 359 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 RNF24Q9Y225 148 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 BZW2Q9Y6E2 419 aaKnown RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 ICE1Q9Y2F5 2266 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 NUP210Q8TEM1 1887 aaPredicted RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 TDRD15B5MCY1 1934 aaKnown RBP4.17□□□□□ -1.74
SND1-216ENST00000492840 GON4LQ3T8J9 2241 aa4.17□□□□□ -1.74
SND1-216ENST00000492840 TLN1Q9Y490 2541 aaKnown RBP4.16□□□□□ -1.74
SND1-216ENST00000492840 KNTC1P50748 2209 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 A0A087X002 238 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 NSG1A0A0A6YYJ2 146 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 KBTBD11-OT1A0A1B0GTJ5 212 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 A0A1B0GUH1 482 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 PRR23D1E9PI22 279 aaPredicted RBP4.16□□□□□ -1.74
SND1-216ENST00000492840 FAM72CH0Y354 149 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 SULT2B1O00204 365 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 RAB29O14966 203 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 YKT6O15498 198 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 SEMA4FO95754 770 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 CLTAP09496 248 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 PRR23D2P0DMB1 279 aaPredicted RBP4.16□□□□□ -1.74
SND1-216ENST00000492840 PRKACBP22694 351 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 PTGDSP41222 190 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 ELK3P41970 407 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 NSG1P42857 185 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 RFX3P48380 749 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 ALDH3B2P48448 385 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 KPNA2P52292 529 aaKnown RBP4.16□□□□□ -1.74
SND1-216ENST00000492840 PKNOX1P55347 436 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 CCDC173Q0VFZ6 552 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 CALCOCO2Q13137 446 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 OR5I1Q13606 314 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 KCNJ11Q14654 390 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 OXA1LQ15070 435 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 ZNF829Q3KNS6 432 aaPredicted RBP4.16□□□□□ -1.74
SND1-216ENST00000492840 ZNF876PQ49A33 203 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 FAM72AQ5TYM5 149 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 C22orf42Q6IC83 251 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 OR52E8Q6IFG1 317 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 FAM72DQ6L9T8 149 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 ARMCX5Q6P1M9 558 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 SCARA5Q6ZMJ2 495 aa4.16□□□□□ -1.74
SND1-216ENST00000492840 FAM72BQ86X60 149 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms