RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 C1orf162Q8NEQ5 155 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 OR13C2Q8NGS9 318 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 LRTOMTQ8WZ04 291 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 RDH12Q96NR8 316 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 CACNG6Q9BXT2 260 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 SLC7A10Q9NS82 523 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 KIF17Q9P2E2 1029 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 SEC14L4Q9UDX3 406 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 POU2F3Q9UKI9 436 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 BAIAP2Q9UQB8 552 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 SIGLEC7Q9Y286 467 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 POFUT2Q9Y2G5 429 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 ORC6Q9Y5N6 252 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 ALPK2Q86TB3 2170 aa9.62□□□□□ -0.87
TMEM39A-211ENST00000491685 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 TRAV27A0A087WT01 109 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 H3BN98 237 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 H3BNX3 289 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 CDC42EP2O14613 210 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 SSX4O60224 188 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 HLA-DOBP13765 273 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 APEHP13798 732 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 FUT4P22083 530 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 MPGP29372 298 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 TTKP33981 857 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 LGALS3BPQ08380 585 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 CAMK2DQ13557 499 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 RCN1Q15293 331 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 SNCBQ16143 134 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 THEM4Q5T1C6 240 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 TSPO2Q5TGU0 170 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 CD300LDQ6UXZ3 194 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 RASSF6Q6ZTQ3 369 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 PHC2Q8IXK0 858 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 CCDC36Q8IYA8 594 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 CLDN22Q8N7P3 220 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 MOSPD2Q8NHP6 518 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 TXNDC15Q96J42 360 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 MUS81Q96NY9 551 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 C9orf16Q9BUW7 83 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 EMC6Q9BV81 110 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 IFT27Q9BW83 186 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 KCNN2Q9H2S1 579 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 MED29Q9NX70 200 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 IL20Q9NYY1 176 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 B3GAT1Q9P2W7 334 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 AMDHD2Q9Y303 409 aa9.61□□□□□ -0.87
TMEM39A-211ENST00000491685 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 M0R3G1 203 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 TRAF3IP2O43734 574 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 CD5LO43866 347 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 LY6HO94772 140 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 WNT11O96014 354 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 HPRP00739 348 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 RENP00797 406 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 HMGN1P05114 100 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 OSMP13725 252 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 PRKACGP22612 351 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 HSPA13P48723 471 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 CSNK1A1P48729 337 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 SELENOPP49908 381 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ZNF84P51523 738 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 SH3BGRP55822 239 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ERVK-25P63136 954 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 CARD17Q5XLA6 110 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 MEX3DQ86XN8 651 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 C20orf196Q8IYI0 205 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 FBXL14Q8N1E6 418 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ZNF525Q8N782 197 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ARIH2OSQ8N7S6 290 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ICA1LQ8NDH6 482 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 OR9Q2Q8NGE9 314 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 TEX47Q8TBZ9 253 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ERMAPQ96PL5 475 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 OR2M2Q96R28 347 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 DHRS9Q9BPW9 319 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 RBM4BQ9BQ04 359 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 RHNO1Q9BSD3 238 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 KATNB1Q9BVA0 655 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 RBM4Q9BWF3 364 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 TSSK6Q9BXA6 273 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ULBP2Q9BZM5 246 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 SEMA6AQ9H2E6 1030 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 OR52D1Q9H346 318 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 NTN4Q9HB63 628 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 OBP2BQ9NPH6 170 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 NRIP3Q9NQ35 241 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 SLC17A5Q9NRA2 495 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 YAE1D1Q9NRH1 226 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 PAPOLBQ9NRJ5 636 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 GLTPQ9NZD2 209 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 FBXO9Q9UK97 447 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 IER3IP1Q9Y5U9 82 aa9.6□□□□□ -0.87
TMEM39A-211ENST00000491685 ANK2Q01484 3957 aa9.59□□□□□ -0.87
TMEM39A-211ENST00000491685 ATP6V1G2-DDX39BF2Z307 99 aa9.59□□□□□ -0.87
TMEM39A-211ENST00000491685 RPL36A-HNRNPH2H7BZ11 118 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms