RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 THEM4Q5T1C6 240 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 LEG1Q6P5S2 330 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 RANBP3LQ86VV4 465 aaPredicted RBP17.6■□□□□ 0.41
NELFE-210ENST00000491139 GTF2H4Q92759 462 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 MS4A7Q9GZW8 240 aaPredicted RBP17.6■□□□□ 0.41
NELFE-210ENST00000491139 SLCO1B3Q9NPD5 702 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 MED4Q9NPJ6 270 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 SDR39U1Q9NRG7 319 aaPredicted RBP17.6■□□□□ 0.41
NELFE-210ENST00000491139 CYSLTR2Q9NS75 346 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 TAS2R5Q9NYW4 299 aa17.6■□□□□ 0.41
NELFE-210ENST00000491139 POLR3KQ9Y2Y1 108 aaPredicted RBP17.6■□□□□ 0.41
NELFE-210ENST00000491139 PRORSD1PA6NEY8 169 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 TPST2O60704 377 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 SBK2P0C263 348 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 PGA4P0DJD7 388 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 PGA3P0DJD8 388 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 LIPAP38571 399 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 ZNF84P51523 738 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 CDK6Q00534 326 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 SPATA46Q5T0L3 261 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 GCNT6Q5T4J0 391 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 EPGNQ6UW88 154 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 UNQ6126/PRO20091Q6UXV3 157 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 LRRC18Q8N456 261 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 BHLHE22Q8NFJ8 381 aaPredicted RBP17.59■□□□□ 0.41
NELFE-210ENST00000491139 OR9I1Q8NGQ6 314 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 IPCEF1Q8WWN9 437 aaPredicted RBP17.59■□□□□ 0.41
NELFE-210ENST00000491139 TAF15Q92804 592 aaKnown RBP eCLIP17.59■□□□□ 0.41
NELFE-210ENST00000491139 NPHS2Q9NP85 383 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 EIF3KQ9UBQ5 218 aaKnown RBP17.59■□□□□ 0.41
NELFE-210ENST00000491139 INSIG2Q9Y5U4 225 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 NPTNQ9Y639 398 aa17.59■□□□□ 0.41
NELFE-210ENST00000491139 ZSCAN5BA6NJL1 495 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 TRAPPC2LH3BP13 241 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 ATP8B1O43520 1251 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 IGHG1P01857 330 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 ADH4P08319 380 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 MMP7P09237 267 aaPredicted RBP17.58■□□□□ 0.4
NELFE-210ENST00000491139 ZNF12P17014 697 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 MDKP21741 143 aaPredicted RBP17.58■□□□□ 0.4
NELFE-210ENST00000491139 STOMP27105 288 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 MPV17P39210 176 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 CLRN1P58418 232 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 PABPC1L2AQ5JQF8 200 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 SLC2A7Q6PXP3 512 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 KLHL36Q8N4N3 616 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 SPICQ8N5J4 248 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 MARS2Q96GW9 593 aaKnown RBP17.58■□□□□ 0.4
NELFE-210ENST00000491139 DCLRE1CQ96SD1 692 aaKnown RBP17.58■□□□□ 0.4
NELFE-210ENST00000491139 ZNF607Q96SK3 696 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 WFDC6Q9BQY6 131 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 SIKE1Q9BRV8 207 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 KCNN2Q9H2S1 579 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 ZDHHC8Q9ULC8 765 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 TRIM33Q9UPN9 1127 aa17.58■□□□□ 0.4
NELFE-210ENST00000491139 TANC2Q9HCD6 1990 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 MGRN1O60291 552 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 CH25HO95992 272 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 IGHV2-70P01814 119 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 MTNR1AP48039 350 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 ZNF74Q16587 644 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 TMEM255AQ5JRV8 349 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 MBNL2Q5VZF2 373 aaKnown RBP17.57■□□□□ 0.4
NELFE-210ENST00000491139 ZNF613Q6PF04 617 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 LINC00114Q6XXX2 140 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 ZNF101Q8IZC7 436 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 SLC25A40Q8TBP6 338 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 KLF14Q8TD94 323 aaPredicted RBP17.57■□□□□ 0.4
NELFE-210ENST00000491139 GEMIN6Q8WXD5 167 aaKnown RBP17.57■□□□□ 0.4
NELFE-210ENST00000491139 MCHR2Q969V1 340 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 TMIGD2Q96BF3 282 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 OR52B2Q96RD2 323 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 DIRC2Q96SL1 478 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 CCDC28BQ9BUN5 200 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 EVA1AQ9H8M9 152 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 PATZ1Q9HBE1 687 aaKnown RBP17.57■□□□□ 0.4
NELFE-210ENST00000491139 NANSQ9NR45 359 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 CGGBP1Q9UFW8 167 aaPredicted RBP17.57■□□□□ 0.4
NELFE-210ENST00000491139 EGFL7Q9UHF1 273 aa17.57■□□□□ 0.4
NELFE-210ENST00000491139 UBDO15205 165 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 POLR3GO15318 223 aaPredicted RBP17.56■□□□□ 0.4
NELFE-210ENST00000491139 SERPINB7O75635 380 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 HIST1H2ABP04908 130 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 CD55P08174 381 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 WNT5AP41221 380 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 SLC6A9P48067 706 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 HIST3H3Q16695 136 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 HIST3H2AQ7L7L0 130 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 HIST1H2ACQ93077 130 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 POM121L2Q96KW2 1035 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 ZNF347Q96SE7 839 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 MCHR1Q99705 422 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 OR2J1Q9GZK6 312 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 CCNB1IP1Q9NPC3 277 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 MMP24Q9Y5R2 645 aa17.56■□□□□ 0.4
NELFE-210ENST00000491139 PRKDCP78527 4128 aaKnown RBP17.56■□□□□ 0.4
NELFE-210ENST00000491139 C5orf49A4QMS7 147 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 CHP2O43745 196 aa17.55■□□□□ 0.4
NELFE-210ENST00000491139 HOXB9P17482 250 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms