RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MIDNQ504T8 468 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 MAVSQ7Z434 540 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 NOXO1Q8NFA2 376 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 MCHR2Q969V1 340 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 SLC25A28Q96A46 364 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 KCNN2Q9H2S1 579 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 ZNF229Q9UJW7 825 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 CORO2BQ9UQ03 480 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 AUP1Q9Y679 476 aa17.47■□□□□ 0.39
CLIP2-208ENST00000491075 ZSCAN5BA6NJL1 495 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 IGHMP01871 453 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 HIST1H2ABP04908 130 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 CCNOP22674 350 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 STOMP27105 288 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 MPV17P39210 176 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 STX1BP61266 288 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 ZMAT1Q5H9K5 638 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 PABPC1L2AQ5JQF8 200 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 SPATA46Q5T0L3 261 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 MBNL2Q5VZF2 373 aaKnown RBP17.46■□□□□ 0.39
CLIP2-208ENST00000491075 TTC33Q6PID6 262 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-208ENST00000491075 HIST3H2AQ7L7L0 130 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 C1orf174Q8IYL3 243 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 ZNF101Q8IZC7 436 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 LRRC18Q8N456 261 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 HIPK4Q8NE63 616 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 HIST1H2ACQ93077 130 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 MARS2Q96GW9 593 aaKnown RBP17.46■□□□□ 0.39
CLIP2-208ENST00000491075 ZNF347Q96SE7 839 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 DIRC2Q96SL1 478 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 SLITRK2Q9H156 845 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 EIF3KQ9UBQ5 218 aaKnown RBP17.46■□□□□ 0.39
CLIP2-208ENST00000491075 ZDHHC8Q9ULC8 765 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 POLR3KQ9Y2Y1 108 aaPredicted RBP17.46■□□□□ 0.39
CLIP2-208ENST00000491075 NPTNQ9Y639 398 aa17.46■□□□□ 0.39
CLIP2-208ENST00000491075 A0A0G2JK05 382 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 CENPBD1B2RD01 187 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 H3BSA7 217 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 CLDN34H7C241 214 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 M0R3H8 397 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 ASAH2BP0C7U1 165 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 MRPL19P49406 292 aaKnown RBP17.45■□□□□ 0.38
CLIP2-208ENST00000491075 WDR4P57081 412 aaKnown RBP17.45■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF154Q13106 437 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 TMEM255AQ5JRV8 349 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 KLF17Q5JT82 389 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-208ENST00000491075 THEM4Q5T1C6 240 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 WDR93Q6P2C0 686 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 HDDC2Q7Z4H3 204 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 NANOGNBQ7Z5D8 188 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 SPICQ8N5J4 248 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 KLF14Q8TD94 323 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-208ENST00000491075 SEPHS2Q99611 448 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 ARHGDIGQ99819 225 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 MRI1Q9BV20 369 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 MRPL13Q9BYD1 178 aaKnown RBP17.45■□□□□ 0.38
CLIP2-208ENST00000491075 SLC19A3Q9BZV2 496 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 CCNB1IP1Q9NPC3 277 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 MMP26Q9NRE1 261 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 VAPAQ9P0L0 249 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 SLAMF8Q9P0V8 285 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
CLIP2-208ENST00000491075 CPSF4LA6NMK7 179 aaKnown RBP17.44■□□□□ 0.38
CLIP2-208ENST00000491075 IGHV2-70P01814 119 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 CD55P08174 381 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 UMPSP11172 480 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF12P17014 697 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 GPX2P18283 190 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 WNT5AP41221 380 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 MRPS34P82930 218 aaKnown RBP17.44■□□□□ 0.38
CLIP2-208ENST00000491075 ENTPD8Q5MY95 495 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 C10orf128Q5T292 105 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 BCL6BQ8N143 479 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-208ENST00000491075 KLHL36Q8N4N3 616 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 SMYD1Q8NB12 490 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 SLC25A40Q8TBP6 338 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 GEMIN6Q8WXD5 167 aaKnown RBP17.44■□□□□ 0.38
CLIP2-208ENST00000491075 POM121L2Q96KW2 1035 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF48Q96MX3 618 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-208ENST00000491075 OR2J1Q9GZK6 312 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 SIAEQ9HAT2 523 aa17.44■□□□□ 0.38
CLIP2-208ENST00000491075 TRBV5-3A0A0A0MS03 114 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 A0A1W2PRG6 482 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 C5orf49A4QMS7 147 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 EVPLLA8MZ36 301 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 MCIDASD6RGH6 385 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 KPNA4O00629 521 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-208ENST00000491075 GDI2P50395 445 aaKnown RBP17.43■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF133P52736 654 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-208ENST00000491075 OR6T1Q8NGN1 323 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 ADAMTS16Q8TE57 1224 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 SPDL1Q96EA4 605 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 MPP4Q96JB8 637 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 ZNF426Q9BUY5 554 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 IKZF5Q9H5V7 419 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 NPHS2Q9NP85 383 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 INSIG2Q9Y5U4 225 aa17.43■□□□□ 0.38
CLIP2-208ENST00000491075 CMYA5Q8N3K9 4069 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 TMEM120BA0PK00 339 aa17.42■□□□□ 0.38
CLIP2-208ENST00000491075 TRAPPC13A5PLN9 417 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms