RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 FMODQ06828 376 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 SLC36A2Q495M3 483 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 THEM4Q5T1C6 240 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 CCDC80Q76M96 950 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 DHDDSQ86SQ9 333 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 RBM15BQ8NDT2 890 aaKnown RBP13.18□□□□□ -0.3
COL2A1-207ENST00000490609 NOXO1Q8NFA2 376 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 HDAC2Q92769 488 aaKnown RBP13.18□□□□□ -0.3
COL2A1-207ENST00000490609 MPP4Q96JB8 637 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 BCL2L14Q9BZR8 327 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 RNF121Q9H920 327 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 NOTCH1P46531 2555 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 ZSCAN5BA6NJL1 495 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 FBP2O00757 339 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
COL2A1-207ENST00000490609 NGFP01138 241 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 MT-ND1P03886 318 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 ZNF32P17041 273 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 LSP1P33241 339 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 PCGF2P35227 344 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 CLRN1P58418 232 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 MRPS34P82930 218 aaKnown RBP13.17□□□□□ -0.3
COL2A1-207ENST00000490609 PSG4Q00888 419 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 FHL1Q13642 323 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 LAPTM4AQ15012 233 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 TBC1D28Q2M2D7 210 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 SPATA46Q5T0L3 261 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 DPPA2Q7Z7J5 298 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 OR1J1Q8NGS3 322 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 OR10A6Q8NH74 314 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 IPCEF1Q8WWN9 437 aaPredicted RBP13.17□□□□□ -0.3
COL2A1-207ENST00000490609 LIPHQ8WWY8 451 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 GCDHQ92947 438 aaPredicted RBP13.17□□□□□ -0.3
COL2A1-207ENST00000490609 C1orf198Q9H425 327 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 NANOGQ9H9S0 305 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
COL2A1-207ENST00000490609 LEF1Q9UJU2 399 aaPredicted RBP13.17□□□□□ -0.3
COL2A1-207ENST00000490609 CENPBD1B2RD01 187 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 SHOX2O60902 331 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-207ENST00000490609 OR7A10O76100 309 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 SCG5P05408 212 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 ADH4P08319 380 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 ANPEPP15144 967 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 STOMP27105 288 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 ZNF81P51508 661 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 ACTG1P63261 375 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 TTMPQ5BVD1 217 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
COL2A1-207ENST00000490609 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
COL2A1-207ENST00000490609 RFPL4BQ6ZWI9 263 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 CALHM3Q86XJ0 350 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 SLC25A40Q8TBP6 338 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 THOC1Q96FV9 657 aaKnown RBP13.16□□□□□ -0.3
COL2A1-207ENST00000490609 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-207ENST00000490609 C1QTNF5Q9BXJ0 243 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 WNT5BQ9H1J7 359 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 NDUFAF1Q9Y375 327 aa13.16□□□□□ -0.3
COL2A1-207ENST00000490609 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 A0A0X1KG70 313 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 J3QLI3 93 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 SPRY3O43610 288 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 ICMTO60725 284 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 IGF2P01344 180 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 HIST1H2ABP04908 130 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 UMPSP11172 480 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 SELENOVP59797 346 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 PIN1Q13526 163 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-207ENST00000490609 VMACQ2NL98 169 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-207ENST00000490609 HIST3H2AQ7L7L0 130 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 PATL1Q86TB9 770 aaKnown RBP13.15□□□□□ -0.3
COL2A1-207ENST00000490609 C3orf56Q8N813 242 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 LRRC75AQ8NAA5 344 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 KLF14Q8TD94 323 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-207ENST00000490609 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 SNX33Q8WV41 574 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 STON2Q8WXE9 905 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 C22orf15Q8WYQ4 148 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 CCL17Q92583 94 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 HIST1H2ACQ93077 130 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 LRRC58Q96CX6 371 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 OR2J1Q9GZK6 312 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
COL2A1-207ENST00000490609 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms