RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GAL3ST3Q96A11 431 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 EXOSC8Q96B26 276 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 MOAP1Q96BY2 351 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 DGCR14Q96DF8 476 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 NEURL3Q96EH8 262 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 RBM18Q96H35 190 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 MUS81Q96NY9 551 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF607Q96SK3 696 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 EPYCQ99645 322 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 SORBS1Q9BX66 1292 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 YIPF3Q9GZM5 350 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 GABARAPL1Q9H0R8 117 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 CACYBPQ9HB71 228 aaKnown RBP6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 C3orf14Q9HBI5 128 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 TAS2R7Q9NYW3 318 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 PPP4R1LQ9P1A2 415 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 ENOPH1Q9UHY7 261 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 PHF11Q9UIL8 331 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 SIGLEC9Q9Y336 463 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 WIPI2Q9Y4P8 454 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF780BQ9Y6R6 833 aa6.25□□□□□ -1.41
EXOSC3-206ENST00000489414 A0A0A6YYD5 115 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 CIB4A0PJX0 185 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 RNASEK-C17orf49H0YIS7 233 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 UPK1AO00322 258 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 FGF17O60258 216 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 NOL3O60936 208 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 FBXO24O75426 580 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ERAL1O75616 437 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SERPINB7O75635 380 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 IL33O95760 270 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SMIM18P0DKX4 95 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 CSNK2A2P19784 350 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ATP5A1P25705 553 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 MPIP34949 423 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 FRKP42685 505 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 IER3P46695 156 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 CCT3P49368 545 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 NCBP2P52298 156 aaKnown RBP eCLIP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ADARB1P78563 741 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 PRR5P85299 388 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 DGCR2P98153 550 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 APOFQ13790 326 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF267Q14586 743 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 GABRA6Q16445 453 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF239Q16600 458 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 TMEM44Q2T9K0 475 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ADPRMQ3LIE5 342 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ZIK1Q3SY52 487 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 COX20Q5RI15 118 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 RBM48Q5RL73 367 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 HLA-DQA1Q5Y7H0 255 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 TBPL2Q6SJ96 375 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 C6orf120Q7Z4R8 191 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 GPR141Q7Z602 305 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 VTCN1Q7Z7D3 282 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 CYP4Z1Q86W10 505 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ARMC8Q8IUR7 673 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 C10orf111Q8N326 155 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ACOT4Q8N9L9 421 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ATG16L2Q8NAA4 619 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 NUP37Q8NFH4 326 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 OR56A1Q8NGH5 318 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SFXN5Q8TD22 340 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 MAL2Q969L2 176 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 MS4A6EQ96DS6 147 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SLC35G5Q96KT7 338 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 APOL4Q9BPW4 351 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 KATNB1Q9BVA0 655 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF717Q9BY31 904 aaPredicted RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 CXorf36Q9H7Y0 433 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF556Q9HAH1 456 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SMURF2Q9HAU4 748 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 A4GALTQ9NPC4 353 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 SLC35C2Q9NQQ7 365 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 KRT84Q9NSB2 600 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 DDX18Q9NVP1 670 aaKnown RBP6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 FAM118AQ9NWS6 357 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 MS4A12Q9NXJ0 267 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 P2RX2Q9UBL9 471 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 U3KQV3 271 aa6.24□□□□□ -1.41
EXOSC3-206ENST00000489414 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 IGHV1-18A0A0C4DH31 117 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 LOC100130705A0A1B0GUX0 176 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 SCO2A0A1W2PP80 73 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 M0QX08 132 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 TNFRSF11BO00300 401 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 DLGAP1O14490 977 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 TNFSF11O14788 317 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 TMPRSS11DO60235 418 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 SEMG1P04279 462 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 BCHEP06276 602 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 GNAO1P09471 354 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 NR2F6P10588 404 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 NR2F1P10589 423 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 CD28P10747 220 aa6.23□□□□□ -1.41
EXOSC3-206ENST00000489414 ANXA8P13928 327 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms