RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SLC36A2Q495M3 483 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 DNAL1Q4LDG9 190 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 ACTBL2Q562R1 376 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 RBM48Q5RL73 367 aaKnown RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 ANKRD26P1Q6NSI1 321 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 RBMS3Q6XE24 437 aaKnown RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 FAM19A1Q7Z5A9 133 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 LHFPL3Q86UP9 236 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 CBLN2Q8IUK8 224 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 FUNDC1Q8IVP5 155 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 SPAG16Q8N0X2 631 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 EID2Q8N6I1 236 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 SAMD12Q8N8I0 201 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 OR5M1Q8NGP8 315 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 OR6K6Q8NGW6 343 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 OR5B3Q8NH48 314 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 C11orf45Q8TAV5 145 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 SPPL2AQ8TCT8 520 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 RNF133Q8WVZ7 376 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 CRYGNQ8WXF5 182 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF486Q96H40 463 aaPredicted RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 DNAJC1Q96KC8 554 aaKnown RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 HSFY1Q96LI6 401 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF300Q96RE9 604 aaPredicted RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 TSG101Q99816 390 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 KCTD14Q9BQ13 255 aaPredicted RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 AGMATQ9BSE5 352 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 TM2D1Q9BX74 207 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 TOLLIPQ9H0E2 274 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF71Q9NQZ8 489 aaPredicted RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 DEPPQ9NTK1 212 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 MCUBQ9NWR8 336 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 C1orf109Q9NX04 203 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 RHBDL2Q9NX52 303 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 GIN1Q9NXP7 522 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 VAPAQ9P0L0 249 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 MUTYHQ9UIF7 546 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 FBXL3Q9UKT7 428 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 PLLPQ9Y342 182 aa2.75□□□□□ -1.97
PRPF4-203ENST00000488937 TBL2Q9Y4P3 447 aaKnown RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 CFAP65Q6ZU64 1925 aaKnown RBP2.75□□□□□ -1.97
PRPF4-203ENST00000488937 EVC2Q86UK5 1308 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 TTC21AQ8NDW8 1320 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 A0A1B0GU03 582 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 SMIM28A0A1B0GU29 152 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 A0A1B0GW55 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 TVP23AA6NH52 213 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 GOLGA8JA6NMD2 632 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 OR5K4A6NMS3 321 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 GOLGA8KD6RF30 607 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 H0YHG0 523 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 GOLGA8MH3BSY2 632 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 K7ENP7 123 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DYNC1I1O14576 645 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 UGT1A9O60656 530 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DEXIO95424 95 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 LSM8O95777 96 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 CATP04040 527 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 SNRPCP09234 159 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 CD3GP09693 182 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 ACSM4P0C7M7 580 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L2P0CJ85 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L3P0CJ86 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L4P0CJ87 422 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L5P0CJ88 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L6P0CJ89 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L7P0CJ90 424 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 GOLGA8HP0CJ92 632 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 CD1DP15813 335 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 IGFBP3P17936 291 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 HTR1FP30939 366 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 PRKAR2BP31323 418 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 MAS1LP35410 378 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 COILP38432 576 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 GDI2P50395 445 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DVL1P1P54792 670 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 NUP107P57740 925 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 UBE2KP61086 200 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 IRX1P78414 480 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 MRPS11P82912 194 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 ILF3Q12906 894 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 KIAA0141Q14154 515 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 KCNJ11Q14654 390 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 FAM189A2Q15884 450 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 MUC21Q5SSG8 566 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 CLVS2Q5SYC1 327 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 ZNF658Q5TYW1 1059 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUPD1Q68J44 220 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 REP15Q6BDI9 236 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 ARMCX5Q6P1M9 558 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 DUX4L9Q6RFH8 374 aaPredicted RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 WDR82Q6UXN9 313 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 Q6ZSR9 355 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 AHSA2Q719I0 299 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 CHMP1BQ7LBR1 199 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 SSX7Q7RTT5 188 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 SSX6Q7RTT6 188 aa2.74□□□□□ -1.97
PRPF4-203ENST00000488937 TRPT1Q86TN4 253 aaKnown RBP2.74□□□□□ -1.97
PRPF4-203ENST00000488937 MCOLN2Q8IZK6 566 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms