RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 EIF1BO60739 113 aaKnown RBP15.08■□□□□ 0
COL7A1-210ENST00000487017 CHRM2P08172 466 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 ABOP16442 354 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 BSGP35613 385 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 EVX1P49640 407 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 OR13H1Q8NG92 308 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 OR1E3Q8WZA6 343 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 SDHAF2Q9NX18 166 aa15.08■□□□□ 0
COL7A1-210ENST00000487017 ETHE1O95571 254 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 DPP4P27487 766 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 ZNF133P52736 654 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 GRB2P62993 217 aaKnown RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 MRPS34P82930 218 aaKnown RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 H1FNTQ75WM6 255 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 TMEM200AQ86VY9 491 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 DCBLD2Q96PD2 775 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 SCPEP1Q9HB40 452 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 TNFRSF10CO14798 259 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 SPI1P17947 270 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 GLYR1Q49A26 553 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 OGFOD3Q6PK18 319 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 OR6C1Q96RD1 312 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 CTRCQ99895 268 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 C19orf43Q9BQ61 176 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 OR5K3A6NET4 321 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 CLDN20P56880 219 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 TAGLNQ01995 201 aaKnown RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 FAM122BQ7Z309 247 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 SIGLEC6O43699 453 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 AARDQ4LEZ3 155 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 PDLIM3Q53GG5 364 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 MED18Q9BUE0 208 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 SUCNR1Q9BXA5 334 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 FGF21Q9NSA1 209 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 NECAP2Q9NVZ3 263 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 HBG1P69891 147 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 HBG2P69892 147 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 ZNF266Q14584 549 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 HSF5Q4G112 596 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 YOD1Q5VVQ6 348 aaPredicted RBP15.07■□□□□ 0
COL7A1-210ENST00000487017 TBC1D29Q9UFV1 150 aa15.07■□□□□ 0
COL7A1-210ENST00000487017 PHF1O43189 567 aaPredicted RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 FZD6O60353 706 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 DBPQ10586 325 aaPredicted RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 RBMS3Q6XE24 437 aaKnown RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 SYS1Q8N2H4 156 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 RHNO1Q9BSD3 238 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 SLC23A2Q9UGH3 650 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 C17orf112F2Z3M2 114 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 TMX2-CTNND1H3BSU7 103 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 EIF4EP06730 217 aaKnown RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 PRR35P0CG20 571 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 KITLGP21583 273 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 EPHA2P29317 976 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 CSNK1EP49674 416 aaKnown RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 DIO1P49895 249 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 NAXDQ8IW45 347 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 ABHD6Q9BV23 337 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 SPHK1Q9NYA1 384 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 TAS2R4Q9NYW5 299 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 NOSIPQ9Y314 301 aaKnown RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 AIPO00170 330 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 EMC4Q5J8M3 183 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 SOHLH1Q5JUK2 328 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 RNLSQ5VYX0 342 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 PRSS35Q8N3Z0 413 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 AGBL5Q8NDL9 886 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 PIGTQ969N2 578 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 PIGMQ9H3S5 423 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 CHRNB4P30926 498 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 P2RX1P51575 399 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 OR10R2Q8NGX6 335 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 BSCL2Q96G97 398 aaPredicted RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 PIGQQ9BRB3 760 aa15.06■□□□□ 0
COL7A1-210ENST00000487017 FGF20Q9NP95 211 aaPredicted RBP15.06■□□□□ 0
COL7A1-210ENST00000487017 FCMRO60667 390 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 CER1O95813 267 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 IGHEP01854 428 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 SDHAP31040 664 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 TPMTP51580 245 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 CTF1Q16619 201 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 ZFP82Q8N141 532 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 NXT1Q9UKK6 140 aaKnown RBP15.05■□□□□ 0
COL7A1-210ENST00000487017 FITM1A5D6W6 292 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 CCSO14618 274 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 FGF17O60258 216 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 PRAMEF4O60810 478 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 GABRB1P18505 474 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 ENPP1P22413 925 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 CD1CP29017 333 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 PTGER4P35408 488 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 ADPRHP54922 357 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 CLINT1Q14677 625 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 SHEQ5VZ18 495 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 TMPRSS7Q7RTY8 843 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 BCORP1Q8N888 145 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 SLC37A2Q8TED4 501 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 WWTR1Q9GZV5 400 aa15.05■□□□□ 0
COL7A1-210ENST00000487017 SLX4Q8IY92 1834 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms