RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CMTM4Q8IZR5 234 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 OR5T2Q8NGG2 359 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 SLC7A6Q92536 515 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM43Q9BTV4 400 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ST6GALNAC5Q9BVH7 336 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 COPZ2Q9P299 210 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 PRSS37A4D1T9 235 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ALDOBP05062 364 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 CXADRP78310 365 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 PDSS1Q5T2R2 415 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 DCAF12Q5T6F0 453 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 OR10G3Q8NGC4 313 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ZPLD1Q8TCW7 415 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ELP5Q8TE02 316 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ASB17Q8WXJ9 295 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 VOPP1Q96AW1 172 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 HYLS1Q96M11 299 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 DCLRE1CQ96SD1 692 aaKnown RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 CDX2Q99626 313 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 METTL17Q9H7H0 456 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ISYNA1Q9NPH2 558 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ASH2LQ9UBL3 628 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 FAM230AA0A1W2PPH8 454 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ICMTO60725 284 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 SYNGR4O95473 234 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 AMY2BP19961 511 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 NPR2P20594 1047 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ACAA2P42765 397 aaKnown RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ESX1Q8N693 406 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 HOXB13Q92826 284 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF736B4DX44 427 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 MPZL1O95297 269 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 MT-ATP6P00846 226 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 IFNA7P01567 189 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RAB3AP20336 220 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ARSKQ6UWY0 536 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 CFAP77Q6ZQR2 320 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM17Q86X19 198 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 PLCZ1Q86YW0 608 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RFLNBQ8N5W9 214 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 OR5D14Q8NGL3 314 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 OR2G2Q8NGZ5 317 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SNAPC3Q92966 411 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 KIAA1143Q96AT1 154 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 FAM3DQ96BQ1 224 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ELMOD3Q96FG2 381 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SEC22CQ9BRL7 303 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SARGQ9BW04 601 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 PRDM6Q9NQX0 595 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 OR52A1Q9UKL2 312 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 COPS3Q9UNS2 423 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 FLVCR2Q9UPI3 526 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RHBDD3Q9Y3P4 386 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 GOSR2O14653 212 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 TBXA2RP21731 343 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 HTR2CP28335 458 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 FGF9P31371 208 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SLC37A1P57057 533 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ZMYND11Q15326 602 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF141Q15928 474 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 CCDC58Q4VC31 144 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SLC19A3Q9BZV2 496 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 CST11Q9H112 138 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 SAV1Q9H4B6 383 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RANBP3Q9H6Z4 567 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 TAS2R4Q9NYW5 299 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 B9D1Q9UPM9 204 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 M0QYG6 137 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 HTR3BO95264 441 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 EPXP11678 715 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 PSMB1P20618 241 aaKnown RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ACTBP60709 375 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RRAS2P62070 204 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ACTG1P63261 375 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ASAH1Q13510 395 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 ABCA11PQ4W5N1 156 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 RABEPKQ7Z6M1 372 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 MAFAQ8NHW3 353 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-216ENST00000486741 KLK11Q9UBX7 282 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 CAMK2AQ9UQM7 478 aa11.98□□□□□ -0.49
HMGN1-216ENST00000486741 A6NCN8 305 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 OR2AT4A6NND4 320 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SLC22A5O76082 557 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ERCC1P07992 297 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 INHBBP09529 407 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 POU3F2P20265 443 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 CDK2P24941 298 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 CDAP32320 146 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ETV6P41212 452 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF85Q03923 595 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SMCO1Q147U7 214 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 MISPQ8IVT2 679 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF100Q8IYN0 542 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 OR6V1Q8N148 313 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SYS1Q8N2H4 156 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms