RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 BMP4P12644 408 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 CBR1P16152 277 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 NPR2P20594 1047 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 GZMKP49863 264 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF84P51523 738 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 EFNA4P52798 201 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 CTXN1P60606 82 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 ARF1P84077 181 aaKnown RBP8.68□□□□□ -1.02
CPSF4-213ENST00000484112 FHL1Q13642 323 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 FLOT2Q14254 428 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 HIKESHIQ53FT3 197 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 C9orf135Q5VTT2 229 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 CARD17Q5XLA6 110 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 GPR139Q6DWJ6 353 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 FAM166AQ6J272 317 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 C1orf94Q6P1W5 598 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 TBPL2Q6SJ96 375 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 DPY19L2P2Q6ZN68 376 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 OR52J3Q8NH60 311 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 OR51A7Q8NH64 312 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 MOSPD2Q8NHP6 518 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 CCDC124Q96CT7 223 aaKnown RBP8.68□□□□□ -1.02
CPSF4-213ENST00000484112 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
CPSF4-213ENST00000484112 RBP7Q96R05 134 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 WACQ9BTA9 647 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 KATNB1Q9BVA0 655 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 NELFAQ9H3P2 528 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 REEP1Q9H902 201 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 NRIP3Q9NQ35 241 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 GRHPRQ9UBQ7 328 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 SIGLEC7Q9Y286 467 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 LYVE1Q9Y5Y7 322 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 PMF1-BGLAPU3KQ54 211 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 V9GYQ6 96 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 TRAV27A0A087WT01 109 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 DHRS12A0PJE2 317 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ARRDC5A6NEK1 342 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ERICH4A6NGS2 130 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 UNC119BA6NIH7 251 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 H7C417 338 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 TNFRSF11BO00300 401 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 EBAG9O00559 213 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 XKRYO14609 159 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 CDC42EP2O14613 210 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 IMPA2O14732 288 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 OR10H3O60404 316 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 TRMUO75648 421 aaKnown RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 DIRAS1O95057 198 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 CRYAAP02489 173 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 QDPRP09417 244 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 CSF3P09919 207 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 OR8G3PP0DMU2 310 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 CDH2P19022 906 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 HNF1AP20823 631 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 GSTM3P21266 225 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 FUT4P22083 530 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 SDHAP31040 664 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 THBS2P35442 1172 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 RPL4P36578 427 aaKnown RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 GPR4P46093 362 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 LGALS3BPQ08380 585 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 TSPAN31Q12999 210 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 MELKQ14680 651 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 SEC23BQ15437 767 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 PHYHD1Q5SRE7 291 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 LIPNQ5VXI9 398 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 OR2T5Q6IEZ7 315 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF544Q6NX49 715 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 LRFN4Q6PJG9 635 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 SMARCD3Q6STE5 483 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF813Q6ZN06 617 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ZER1Q7Z7L7 766 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ADCK1Q86TW2 530 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 OR13C2Q8NGS9 318 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 OR2T29Q8NH02 315 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF519Q8TB69 540 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 GNPDA2Q8TDQ7 276 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 MCHR2Q969V1 340 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 RSRC1Q96IZ7 334 aaKnown RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 CLPTM1LQ96KA5 538 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 SLC38A2Q96QD8 506 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 SNX18Q96RF0 628 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 KCNS3Q9BQ31 491 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 LRMDAQ9H2I8 198 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 C1orf198Q9H425 327 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 TMEM38BQ9NVV0 291 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 FBXO9Q9UK97 447 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF346Q9UL40 294 aaKnown RBP8.67□□□□□ -1.02
CPSF4-213ENST00000484112 POMPQ9Y244 141 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
CPSF4-213ENST00000484112 A0A096LPE4 126 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 A0A1W2PPZ6 126 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 TCRBV3S1A0A5B6 114 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 ARPC3O15145 178 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 IDH3BO43837 385 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 CCNB2O95067 398 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 TXNDC12O95881 172 aa8.66□□□□□ -1.02
CPSF4-213ENST00000484112 TGFAP01135 160 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms