RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZIM2Q9NZV7 527 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TESQ9UGI8 421 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 UGT2A1Q9Y4X1 527 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TANC2Q9HCD6 1990 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 WNK1Q9H4A3 2382 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TRBV5-3A0A0A0MS03 114 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 TMEM247A6NEH6 219 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 F5H0A9 414 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 GPANK1O95872 356 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 CH25HO95992 272 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 IGHMP01871 453 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ASAH2BP0C7U1 165 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 IDO1P14902 403 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 DRD4P21917 467 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 CCNOP22674 350 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 GCH1P30793 250 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 RGS8P57771 180 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 CDK6Q00534 326 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 FADDQ13158 208 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ZMYND11Q15326 602 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 DUSP7Q16829 419 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ARMCX4Q5H9R4 360 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 PAGE3Q5JUK9 113 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 C16orf87Q6PH81 154 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 Q6ZR03 302 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 RFPL4BQ6ZWI9 263 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 LRRC28Q86X40 367 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 KIR3DL3Q8N743 410 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 GPR32P1Q8NGA4 272 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 AKR7LQ8NHP1 331 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ST7LQ8TDW4 575 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 SLC25A28Q96A46 364 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 DACT3Q96B18 629 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 NMD3Q96D46 503 aaKnown RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 TRIM44Q96DX7 344 aaPredicted RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 C1orf198Q9H425 327 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 POFUT1Q9H488 388 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 ZMAT3Q9HA38 289 aaKnown RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 SSU72Q9NP77 194 aaKnown RBP10.83□□□□□ -0.68
UBR4-213ENST00000483922 MMP24Q9Y5R2 645 aa10.83□□□□□ -0.68
UBR4-213ENST00000483922 A8MXK9 166 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 M0R3H8 397 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 TRMUO75648 421 aaKnown RBP10.82□□□□□ -0.68
UBR4-213ENST00000483922 PLATP00750 562 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 MT-ATP6P00846 226 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 CD55P08174 381 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 ZNF32P17041 273 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 STOMP27105 288 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 PSG4Q00888 419 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 CDK5R2Q13319 367 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 MOGQ16653 247 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 ZNF718Q3SXZ3 478 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 NRN1LQ496H8 165 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 LRIF1Q5T3J3 769 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 HHATQ5VTY9 493 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 NXNQ6DKJ4 435 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 HIST2H2BDQ6DRA6 164 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 REEP3Q6NUK4 255 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 SMYD1Q8NB12 490 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 OR1J2Q8NGS2 313 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 WFDC12Q8WWY7 111 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 MCHR1Q99705 422 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 ARHGDIGQ99819 225 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 PRSS27Q9BQR3 290 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 RMND5AQ9H871 391 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 CACYBPQ9HB71 228 aaKnown RBP10.82□□□□□ -0.68
UBR4-213ENST00000483922 MEPEQ9NQ76 525 aaPredicted RBP10.82□□□□□ -0.68
UBR4-213ENST00000483922 TMEM106BQ9NUM4 274 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 VAPAQ9P0L0 249 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 GMEB1Q9Y692 573 aa10.82□□□□□ -0.68
UBR4-213ENST00000483922 IQCMA0A1B0GVH7 501 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 C5orf58C9J3I9 102 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 HOXA3O43365 443 aaPredicted RBP10.81□□□□□ -0.68
UBR4-213ENST00000483922 RNF13O43567 381 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 OR6A2O95222 327 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
UBR4-213ENST00000483922 SLC2A10O95528 541 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 PTHP01270 115 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 F13BP05160 661 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 WNT2P09544 360 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 AQP1P29972 269 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 PCGF2P35227 344 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 APLNRP35414 380 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 UGT2B15P54855 530 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 PSG7Q13046 419 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 ENTPD8Q5MY95 495 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 C10orf128Q5T292 105 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 GCNT6Q5T4J0 391 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 SWT1Q5T5J6 900 aaKnown RBP10.81□□□□□ -0.68
UBR4-213ENST00000483922 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 DPPA2Q7Z7J5 298 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 POU5F2Q8N7G0 328 aa10.81□□□□□ -0.68
UBR4-213ENST00000483922 ZNF283Q8N7M2 679 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms