RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CBLL1Q75N03 491 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 CXXC5Q7LFL8 322 aaKnown RBP8.99□□□□□ -0.97
CPSF4-212ENST00000482251 RNF148Q8N7C7 305 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 AKR7LQ8NHP1 331 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 UBASH3BQ8TF42 649 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 LIPHQ8WWY8 451 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 NABP1Q96AH0 204 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 BEX2Q9BXY8 128 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 SHARPINQ9H0F6 387 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 TXNIPQ9H3M7 391 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 DENND2DQ9H6A0 471 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-212ENST00000482251 CCNB1IP1Q9NPC3 277 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 CDC42EP3Q9UKI2 254 aa8.99□□□□□ -0.97
CPSF4-212ENST00000482251 A0A087WUU8 490 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 CDC42EP2O14613 210 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 DIRAS1O95057 198 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 TGFAP01135 160 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 IGF2P01344 180 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 IGHMP01871 453 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 MMP7P09237 267 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 TSPAN19P0C672 248 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 APLNRP35414 380 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 RPL4P36578 427 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 MAGEB1P43366 347 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 SLC9A3P48764 834 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 PSME3P61289 254 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 RPL27P61353 136 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 SRSF2Q01130 221 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 PLP2Q04941 152 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FGD3Q5JSP0 725 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 ELFN2Q5R3F8 820 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 C10orf128Q5T292 105 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 OTPQ5XKR4 325 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 OAFQ86UD1 273 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF786Q8N393 782 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FAM86B1Q8N7N1 296 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 LRRC75AQ8NAA5 344 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FAM156AQ8NDB6 213 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 CPEB3Q8NE35 698 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 NMD3Q96D46 503 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FAM46AQ96IP4 442 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 KCNN2Q9H2S1 579 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 ADA2Q9NZK5 511 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 TAAR3PQ9P1P4 343 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 STX18Q9P2W9 335 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FBXO9Q9UK97 447 aaPredicted RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF346Q9UL40 294 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 AP3M1Q9Y2T2 418 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 ADAM18Q9Y3Q7 739 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 SVEP1Q4LDE5 3571 aa8.98□□□□□ -0.97
CPSF4-212ENST00000482251 FBN1P35555 2871 aaKnown RBP8.98□□□□□ -0.97
CPSF4-212ENST00000482251 NPIPB13A6NJU9 1138 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 RNF212BA8MTL3 300 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 CENPBD1B2RD01 187 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 NPIPB4C9JG80 1138 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 MGRN1O60291 552 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 CDC14BO60729 498 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 LILRA1O75019 489 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 PRSS23O95084 383 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 IFNA2P01563 188 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 GIFP27352 417 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 LAP3P28838 519 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF133P52736 654 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 CHN2P52757 468 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 GYS2P54840 703 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 KLF3P57682 345 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 MRPS34P82930 218 aaKnown RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 PRKCDQ05655 676 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 FHL1Q13642 323 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 RIN1Q13671 783 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 FAM120AOSQ5T036 256 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 PODNL1Q6PEZ8 512 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 SLC25A47Q6Q0C1 308 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 MBOAT2Q6ZWT7 520 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 TSEN54Q7Z6J9 526 aaKnown RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 DPPA2Q7Z7J5 298 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF101Q8IZC7 436 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF540Q8NDQ6 660 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 OR1J1Q8NGS3 322 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ZNF519Q8TB69 540 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 SNX33Q8WV41 574 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ACOT11Q8WXI4 607 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 YIPF5Q969M3 257 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 HOPXQ9BPY8 73 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ALG12Q9BV10 488 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 MYLK2Q9H1R3 596 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 C1orf198Q9H425 327 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 SIAEQ9HAT2 523 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 SMURF2Q9HAU4 748 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 LPAR2Q9HBW0 351 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 EMC7Q9NPA0 242 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 ABCD2Q9UBJ2 740 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 IL20RAQ9UHF4 553 aa8.97□□□□□ -0.97
CPSF4-212ENST00000482251 SLC22A23A1A5C7 686 aa8.96□□□□□ -0.98
CPSF4-212ENST00000482251 C5orf49A4QMS7 147 aa8.96□□□□□ -0.98
CPSF4-212ENST00000482251 WNT9BO14905 357 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms