RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OR7G2Q8NG99 324 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 ACMSDQ8TDX5 336 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 STARD8Q92502 1023 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 CENPKQ9BS16 269 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 LINC00597Q9H2U6 94 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 VCXQ9H320 206 aa3.44□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF816-ZNF321PA0A0X1KG74 233 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 OR2AG2A6NM03 316 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 RNF13O43567 381 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 IGKV3-11P04433 115 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 RPS9P46781 194 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 TMED10P49755 219 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 SLC25A11Q02978 314 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 SRSF5Q13243 272 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 IDI1Q13907 227 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 PTGES3Q15185 160 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 CHRNA6Q15825 494 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 ARMC12Q5T9G4 340 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 Q6ZR03 302 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 CCDC73Q6ZRK6 1079 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 NCCRP1Q6ZVX7 275 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 GTPBP8Q8N3Z3 284 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 LIX1Q8N485 282 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 FAM86B1Q8N7N1 296 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 OR4S2Q8NH73 311 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 LKAAEAR1Q8TD35 194 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 CCDC126Q96EE4 140 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 PATZ1Q9HBE1 687 aaKnown RBP3.43□□□□□ -1.86
SF3B1-210ENST00000482158 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
SF3B1-210ENST00000482158 USP47Q96K76 1375 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 IGHV3-66A0A0C4DH42 116 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 RSPH10B2B2RC85 870 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 RTL8CO15255 209 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 DPM1O60762 260 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF324O75467 553 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-210ENST00000482158 RETP07949 1114 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 ANXA5P08758 320 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 RSPH10BP0C881 870 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF250P15622 560 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 NAA10P41227 235 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-210ENST00000482158 BEX3Q00994 111 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 CLINT1Q14677 625 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 KCTD19Q17RG1 926 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-210ENST00000482158 FAM83EQ2M2I3 478 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 HES5Q5TA89 166 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 LRRC66Q68CR7 880 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 DNAJC24Q6P3W2 148 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 FAM92BQ6ZTR7 304 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 OR10G4Q8NGN3 311 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 FAM3DQ96BQ1 224 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 BMFQ96LC9 184 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 ST3GAL6Q9Y274 331 aa3.42□□□□□ -1.86
SF3B1-210ENST00000482158 DENND4AQ7Z401 1863 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 INS-IGF2F8WCM5 200 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 CDC7O00311 574 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 CLOCKO15516 846 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ERLIN1O75477 346 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 SRP72O76094 671 aaKnown RBP3.41□□□□□ -1.86
SF3B1-210ENST00000482158 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
SF3B1-210ENST00000482158 PRPS2P11908 318 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 MAS1LP35410 378 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 CDKN2BP42772 138 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 MNAT1P51948 309 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF138P52744 262 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 MXD1Q05195 221 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ZSCAN26Q16670 478 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ANKRD22Q5VYY1 191 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 CERS6Q6ZMG9 384 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ABHD13Q7L211 337 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 OR10J6PQ8NGY7 276 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 SLC7A13Q8TCU3 470 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 EXOSC8Q96B26 276 aaKnown RBP3.41□□□□□ -1.86
SF3B1-210ENST00000482158 OR2A5Q96R48 311 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 ZNF629Q9UEG4 869 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-210ENST00000482158 AKNAQ7Z591 1439 aa3.41□□□□□ -1.86
SF3B1-210ENST00000482158 IGHV5-51A0A0C4DH38 117 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 GLYATL1P3A0A0U1RQE8 302 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 OR2J3O76001 311 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 LONP1P36776 959 aaKnown RBP3.4□□□□□ -1.87
SF3B1-210ENST00000482158 CYB561P49447 251 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 LINC00315P59091 139 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 ALKBH6Q3KRA9 238 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 HSP90AB3PQ58FF7 597 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 SOHLH1Q5JUK2 328 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 KHDRBS2Q5VWX1 349 aaKnown RBP3.4□□□□□ -1.87
SF3B1-210ENST00000482158 RAET1LQ5VY80 246 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 HDDC2Q7Z4H3 204 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 CYB561D1Q8N8Q1 229 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 SERPINB12Q96P63 405 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 PLIN2Q99541 437 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 RPP21Q9H633 154 aaKnown RBP3.4□□□□□ -1.87
SF3B1-210ENST00000482158 KCNJ16Q9NPI9 418 aa3.4□□□□□ -1.87
SF3B1-210ENST00000482158 IGKV2D-24A0A075B6R9 120 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms