RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 TPST1O60507 370 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 STOMP27105 288 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 CD80P33681 288 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 CDH12P55289 794 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 HNRNPA0Q13151 305 aaKnown RBP14.46□□□□□ -0.09
VIM-204ENST00000478746 MELKQ14680 651 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 NRN1LQ496H8 165 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 TMEM155Q4W5P6 130 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 PABPC1L2AQ5JQF8 200 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 TMEM255AQ5JRV8 349 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 CEP85LQ5SZL2 805 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 MBNL2Q5VZF2 373 aaKnown RBP14.46□□□□□ -0.09
VIM-204ENST00000478746 DHRS4L2Q6PKH6 230 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 LRRC28Q86X40 367 aaPredicted RBP14.46□□□□□ -0.09
VIM-204ENST00000478746 HIPK4Q8NE63 616 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 SLC25A40Q8TBP6 338 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 KLF14Q8TD94 323 aaPredicted RBP14.46□□□□□ -0.09
VIM-204ENST00000478746 CITED1Q99966 193 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 SPATA5L1Q9BVQ7 753 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 KCNN2Q9H2S1 579 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 RAD21L1Q9H4I0 556 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 TMEM106BQ9NUM4 274 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 TAS2R5Q9NYW4 299 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 OR5V1Q9UGF6 321 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 KLHL21Q9UJP4 597 aa14.46□□□□□ -0.09
VIM-204ENST00000478746 A8MXK9 166 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 CLIC1O00299 241 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 HOXA3O43365 443 aaPredicted RBP14.45□□□□□ -0.1
VIM-204ENST00000478746 CD55P08174 381 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 MMP7P09237 267 aaPredicted RBP14.45□□□□□ -0.1
VIM-204ENST00000478746 PGA4P0DJD7 388 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 PGA3P0DJD8 388 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 BGNP21810 368 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 ZNF84P51523 738 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 RAG2P55895 527 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 RGS8P57771 180 aaPredicted RBP14.45□□□□□ -0.1
VIM-204ENST00000478746 TNFAIP6P98066 277 aaPredicted RBP14.45□□□□□ -0.1
VIM-204ENST00000478746 STX3Q13277 289 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 ESCO2Q56NI9 601 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 C6orf10Q5SRN2 563 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 OLFML2AQ68BL7 652 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 KRT73Q86Y46 540 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 ZNF101Q8IZC7 436 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 UBE2FQ969M7 185 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 ZDHHC16Q969W1 377 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 TMEM109Q9BVC6 243 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 SLC19A3Q9BZV2 496 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 OR2J1Q9GZK6 312 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
VIM-204ENST00000478746 MSL2Q9HCI7 577 aa14.45□□□□□ -0.1
VIM-204ENST00000478746 MDFIC2A0A1B0GVS7 189 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 C5orf49A4QMS7 147 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 MGRN1O60291 552 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 PLATP00750 562 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 PPIAL4GP0DN37 164 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 BMP2P12643 396 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 EPHA3P29320 983 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 RBMXP38159 391 aaKnown RBP14.44□□□□□ -0.1
VIM-204ENST00000478746 WNT5AP41221 380 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 CLRN1P58418 232 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 FADDQ13158 208 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 SWT1Q5T5J6 900 aaKnown RBP14.44□□□□□ -0.1
VIM-204ENST00000478746 MSANTD1Q6ZTZ1 278 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 RHOUQ7L0Q8 258 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 C1orf174Q8IYL3 243 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 BHLHE22Q8NFJ8 381 aaPredicted RBP14.44□□□□□ -0.1
VIM-204ENST00000478746 NFKBIDQ8NI38 313 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 MCHR2Q969V1 340 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 POM121L2Q96KW2 1035 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 NANOGQ9H9S0 305 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 CCNB1IP1Q9NPC3 277 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 TNFRSF19Q9NS68 423 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 CGGBP1Q9UFW8 167 aaPredicted RBP14.44□□□□□ -0.1
VIM-204ENST00000478746 IL20RAQ9UHF4 553 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 SLC13A4Q9UKG4 626 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 TRIM33Q9UPN9 1127 aa14.44□□□□□ -0.1
VIM-204ENST00000478746 TPST2O60704 377 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 CH25HO95992 272 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 IGHG1P01857 330 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 HIST1H2ABP04908 130 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 IDO1P14902 403 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 GDI2P50395 445 aaKnown RBP14.43□□□□□ -0.1
VIM-204ENST00000478746 BTG1P62324 171 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 FBLN7Q53RD9 439 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 ZMAT1Q5H9K5 638 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 BEND6Q5SZJ8 279 aaPredicted RBP14.43□□□□□ -0.1
VIM-204ENST00000478746 NXNQ6DKJ4 435 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 REEP3Q6NUK4 255 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 BTNL3Q6UXE8 466 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 LRRN1Q6UXK5 716 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 HIST3H2AQ7L7L0 130 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 C1QL4Q86Z23 238 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 ZNF283Q8N7M2 679 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 HIST1H2ACQ93077 130 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 UPRTQ96BW1 309 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 ZNF347Q96SE7 839 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 ARHGDIGQ99819 225 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 RBM4BQ9BQ04 359 aaKnown RBP14.43□□□□□ -0.1
VIM-204ENST00000478746 SIAEQ9HAT2 523 aa14.43□□□□□ -0.1
VIM-204ENST00000478746 SSU72Q9NP77 194 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms