RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ZNF567Q8N184 647 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 CA13Q8N1Q1 262 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 MLKLQ8NB16 471 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 TRPV3Q8NET8 790 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 NEK11Q8NG66 645 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 NANPQ8TBE9 248 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 NT5CQ8TCD5 201 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 SPPL2AQ8TCT8 520 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 TMEM186Q96B77 213 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 S100PBPQ96BU1 408 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 PYCR2Q96C36 320 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 MUCL1Q96DR8 90 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 RBM18Q96H35 190 aaKnown RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 SMIM10Q96HG1 83 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 RUNDC3BQ96NL0 473 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 POTEKPQ9BYX7 375 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 BPESC1Q9GZL8 116 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 STMN4Q9H169 189 aaPredicted RBP3.64□□□□□ -1.83
VPS50-214ENST00000477935 ANAPC7Q9UJX3 599 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 ANAPC5Q9UJX4 755 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS50-214ENST00000477935 HEATR5BQ9P2D3 2071 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 MED12LQ86YW9 2145 aa3.64□□□□□ -1.83
VPS50-214ENST00000477935 HERC2O95714 4834 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA8QA0A0J9YX86 632 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 IQANK1A0A1B0GTG1 560 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CCDC162PA2VCL2 907 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 LRP5LA4QPB2 252 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA8OA6NCC3 632 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 IQCF5A8MTL0 148 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 HACD1B0YJ81 288 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 E7EQL1 145 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 NPIPA7E9PJI5 369 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA8NF8WBI6 632 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 G3V2L1 256 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 H3BMM5 538 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CLDN34H7C241 214 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA8RI6L899 631 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 ABCD4O14678 606 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 OR1F1O43749 312 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CYTIPO60759 359 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PDE5AO76074 875 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 HPRP00739 348 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 IGKV3-11P04433 115 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 HSP90AA1P07900 732 aaKnown RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 SERPINA6P08185 405 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 NUDT17P0C025 328 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 NPIPA8P0DM63 369 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 ANPEPP15144 967 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 IL32P24001 234 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PPP2R1BP30154 601 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 SRD5A2P31213 254 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 HPDP32754 393 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 COILP38432 576 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 TTPAP49638 278 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 STARP49675 285 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 KHKP50053 298 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 RAB38P57729 211 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 RAB8AP61006 207 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 DHODHQ02127 395 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 DOC2AQ14183 400 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 TFDP2Q14188 446 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CARTPTQ16568 116 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 ODF2Q5BJF6 829 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 SAXO2Q658L1 398 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 TRIM40Q6P9F5 258 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 AFTPHQ6ULP2 937 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CDKL3Q8IVW4 592 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 TCEANCQ8N8B7 351 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 C17orf47Q8NEP4 570 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 OR4D10Q8NGI6 311 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 OR4C15Q8NGM1 316 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 OR4L1Q8NH43 312 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 OCC1Q8TAD7 63 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 ZNF721Q8TF20 911 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CHPT1Q8WUD6 406 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 RAPGEF5Q92565 580 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 NSMAFQ92636 917 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GPA33Q99795 319 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 CITED1Q99966 193 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 INPP5KQ9BT40 448 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 GBA3Q9H227 469 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PARLQ9H300 379 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 RIMS4Q9H426 269 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 RNF121Q9H920 327 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 BEX1Q9HBH7 125 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 SLC7A10Q9NS82 523 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PAQR5Q9NXK6 330 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 TAS2R16Q9NYV7 291 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PDP1Q9P0J1 537 aaPredicted RBP3.63□□□□□ -1.83
VPS50-214ENST00000477935 SCN3AQ9NY46 2000 aa3.63□□□□□ -1.83
VPS50-214ENST00000477935 PRR14LQ5THK1 2151 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 TENM2Q9NT68 2774 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 C5orf63A6NC05 138 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 KRT87PA6NCN2 255 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 J3QLI3 93 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms