RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CD5LO43866 347 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 AIFM1O95831 613 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 SLC1A1P43005 524 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 CSNK1DP48730 415 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 RAB9AP51151 201 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 KCTD19Q17RG1 926 aaPredicted RBP3.86□□□□□ -1.79
VPS50-212ENST00000476413 TMEM183BQ1AE95 376 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 HSDL1Q3SXM5 330 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 CYB5R2Q6BCY4 276 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 TMEM179Q6ZVK1 233 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 CENPQQ7L2Z9 268 aaPredicted RBP3.86□□□□□ -1.79
VPS50-212ENST00000476413 C6orf120Q7Z4R8 191 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 TMEM183AQ8IXX5 376 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 MKXQ8IYA7 352 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 TSSK3Q96PN8 268 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 MTG1Q9BT17 334 aaPredicted RBP3.86□□□□□ -1.79
VPS50-212ENST00000476413 AUNIPQ9H7T9 357 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 STOX2Q9P2F5 926 aaPredicted RBP3.86□□□□□ -1.79
VPS50-212ENST00000476413 MAP3K15Q6ZN16 1313 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 WDR19Q8NEZ3 1342 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 ATRXP46100 2492 aa3.86□□□□□ -1.79
VPS50-212ENST00000476413 TET2Q6N021 2002 aaPredicted RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 WRBO00258 174 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 LAD1O00515 517 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 PES1O00541 588 aaKnown RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 NDUFAB1O14561 156 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 XKRYO14609 159 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 EIF4E2O60573 245 aaKnown RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 DPM1O60762 260 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 ZDHHC11BP0C7U3 371 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 PSG2P11465 335 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 AK4P27144 223 aaPredicted RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 CXCL5P42830 114 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CCR6P51684 374 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 ZNF136P52737 540 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CRISP1P54107 249 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 ADARB1P78563 741 aaKnown RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 MXD1Q05195 221 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 TTLL9Q3SXZ7 439 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CMTM1Q8IZ96 169 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 MDS2Q8NDY4 140 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CCDC54Q8NEL0 328 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CD300LFQ8TDQ1 290 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 CAPSLQ8WWF8 208 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 GIMAP1Q8WWP7 306 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 STARD8Q92502 1023 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 IL22RA2Q969J5 263 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 HDHD3Q9BSH5 251 aaPredicted RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 UXTQ9UBK9 157 aaPredicted RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 ST3GAL6Q9Y274 331 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 GOLT1BQ9Y3E0 138 aa3.85□□□□□ -1.79
VPS50-212ENST00000476413 MRPS18BQ9Y676 258 aaKnown RBP3.85□□□□□ -1.79
VPS50-212ENST00000476413 TRBV6-6A0A0A6YYG2 114 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 PRSS37A4D1T9 235 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 SRP72O76094 671 aaKnown RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 ERCC1P07992 297 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 STOMP27105 288 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 GPX4P36969 197 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 SLC7A9P82251 487 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 SMARCB1Q12824 385 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 CLINT1Q14677 625 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 ZNF658BQ4V348 819 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 PIGGQ5H8A4 983 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 TMEM53Q6P2H8 277 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 H2AFVQ71UI9 128 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 EIF3MQ7L2H7 374 aaKnown RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 GABRG1Q8N1C3 465 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 ARIH2OSQ8N7S6 290 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 AGR3Q8TD06 166 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 C8orf44Q96CB5 159 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 FAM210BQ96KR6 192 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 OR5B12Q96R08 314 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 DDX18Q9NVP1 670 aaKnown RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 RBAKQ9NYW8 714 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 MTCH1Q9NZJ7 389 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 LGALS13Q9UHV8 139 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 SLC17A4Q9Y2C5 497 aa3.84□□□□□ -1.79
VPS50-212ENST00000476413 CAB39Q9Y376 341 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 CENPJQ9HC77 1338 aaPredicted RBP3.84□□□□□ -1.79
VPS50-212ENST00000476413 TEX46H3BTG2 121 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 KMOO15229 486 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 GNAO1P09471 354 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 ACSM4P0C7M7 580 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 PNMA6AP0CW24 399 aaPredicted RBP3.83□□□□□ -1.8
VPS50-212ENST00000476413 BCKDHBP21953 392 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 OMGP23515 440 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 GTF2E2P29084 291 aaKnown RBP3.83□□□□□ -1.8
VPS50-212ENST00000476413 RPS5P46782 204 aaKnown RBP3.83□□□□□ -1.8
VPS50-212ENST00000476413 CX3CR1P49238 355 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 HMGCS1Q01581 520 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 ITIH4Q14624 930 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L9Q6RFH8 374 aaPredicted RBP3.83□□□□□ -1.8
VPS50-212ENST00000476413 MREGQ8N565 214 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 SRSF12Q8WXF0 261 aaKnown RBP3.83□□□□□ -1.8
VPS50-212ENST00000476413 CYYR1Q96J86 154 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 PRRC1Q96M27 445 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 SERPINB12Q96P63 405 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 HRASLS2Q9NWW9 162 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 LYARQ9NX58 379 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms