RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 IL9P15248 144 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GABRG2P18507 467 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IL1RNP18510 177 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IDSP22304 550 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CPT2P23786 658 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CD27P26842 260 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 AK4P27144 223 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TEAD1P28347 426 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HTR1EP28566 365 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MAT2AP31153 395 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TIA1P31483 386 aaKnown RBP eCLIP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM23P36406 574 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HPCAL1P37235 193 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MAGEA2P43356 314 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GNPDA1P46926 289 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CAPZA2P47755 286 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HNMTP50135 292 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CDK9P50750 372 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RAB28P51157 221 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HNRNPFP52597 415 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GTF2A1P52655 376 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 EFNA3P52797 238 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CASP9P55211 416 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CLDN8P56748 225 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 KCNK10P57789 538 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 KIAA1024LP59773 190 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NAA20P61599 178 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 POLR2LP62875 67 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RPS21P63220 83 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 UBE2IP63279 158 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HBA1P69905 142 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CSNK1G2P78368 415 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 VLDLRP98155 873 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IRF8Q02556 426 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 KLC1Q07866 573 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ACSM1Q08AH1 577 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ELP6Q0PNE2 266 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TRAP1Q12931 704 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 STX5Q13190 355 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SRSF5Q13243 272 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SGCGQ13326 291 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ART3Q13508 389 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TSTA3Q13630 321 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PDE7AQ13946 482 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 VEZF1Q14119 521 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF146Q15072 292 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PDK3Q15120 406 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PON2Q15165 354 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LTB4RQ15722 352 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MAPK11Q15759 364 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IMPG1Q17R60 797 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SMU1Q2TAY7 513 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NADK2Q4G0N4 442 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IQCCQ4KMZ1 466 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LRRC23Q53EV4 343 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 SPIN4Q56A73 249 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NHSL2Q5HYW2 709 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C9orf152Q5JTZ5 239 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CDKL4Q5MAI5 379 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ARFGEF3Q5TH69 2177 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 AGAP7PQ5VUJ5 663 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LIPJQ5W064 366 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF776Q68DI1 518 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 FAM71E1Q6IPT2 247 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 LAIR2Q6ISS4 152 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PRR27Q6MZM9 219 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MFSD12Q6NUT3 480 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NOXRED1Q6NXP6 359 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MED27Q6P2C8 311 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZFP1Q6P2D0 407 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PNCKQ6P2M8 343 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 UNC5DQ6UXZ4 953 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 C3P1Q6ZMU1 363 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 RBPMS2Q6ZRY4 209 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ZBTB49Q6ZSB9 765 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MSANTD1Q6ZTZ1 278 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TMUB2Q71RG4 321 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 NUP54Q7Z3B4 507 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 COMMD6Q7Z4G1 85 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TRMT11Q7Z4G4 463 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 VN1R4Q7Z5H5 301 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TSEN54Q7Z6J9 526 aaKnown RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 VTCN1Q7Z7D3 282 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CENPVQ7Z7K6 275 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 PAQR7Q86WK9 346 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 IFNEQ86WN2 208 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 HORMAD1Q86X24 394 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 MMD2Q8IY49 270 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 H1FOOQ8IZA3 346 aaPredicted RBP1.19□□□□□ -2.22
CCDC39-203ENST00000473854 TDHQ8IZJ6 230 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR8H2Q8N162 312 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 CBR4Q8N4T8 237 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 ANKFN1Q8N957 763 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 THAP8Q8NA92 274 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 POMGNT2Q8NAT1 580 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 DENND6BQ8NEG7 585 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR7G3Q8NG95 312 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 GPR32P1Q8NGA4 272 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR8J3Q8NGG0 315 aa1.19□□□□□ -2.22
CCDC39-203ENST00000473854 OR8J2Q8NGG1 315 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms