RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 F5H0A9 414 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 LATO43561 262 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 IFNA6P05013 189 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CCKBRP32239 447 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PBX2P40425 430 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 AQP2P41181 271 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CTAG1AP78358 180 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 IGLV3-21P80748 117 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 ELOCQ15369 112 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TAF13Q15543 124 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 NKAIN2Q5VXU1 208 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ATG4DQ86TL0 474 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 SLC25A42Q86VD7 318 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 OR1M1Q8NGA1 313 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 OR10G6Q8NH81 332 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 HMGB4Q8WW32 186 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PMEPA1Q969W9 287 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CAPNS2Q96L46 248 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CNTNAP3BQ96NU0 1288 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 S1PR5Q9H228 398 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 FGF22Q9HCT0 170 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PRTFDC1Q9NRG1 225 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 HHLA2Q9UM44 414 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 MEMO1Q9Y316 297 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 MYO9BQ13459 2157 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PQLC2LA1A4F0 135 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TVP23AA6NH52 213 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF860A6NHJ4 632 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 GRXCR1A8MXD5 290 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 H0YC42 278 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 LGALS8O00214 317 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 EIF4E2O60573 245 aaKnown RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 CTSVO60911 334 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 SLC25A12O75746 678 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 SIX6O95475 246 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PLATP00750 562 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 HLA-AP01891 365 aaKnown RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 ASAH2BP0C7U1 165 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CCL5P13501 91 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 GJA4P35212 333 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CDKN2AP42771 156 aaKnown RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 ARRB1P49407 418 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 DCAF7P61962 342 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ROM1Q03395 351 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 HMGN3Q15651 99 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ALG11Q2TAA5 492 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 COL13A1Q5TAT6 717 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 JMJD6Q6NYC1 403 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 FAAP20Q6NZ36 180 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TMEM184AQ6ZMB5 413 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TMED4Q7Z7H5 227 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 GALNT16Q8N428 558 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 FRMD1Q8N878 549 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 LRRC75AQ8NAA5 344 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF511Q8NB15 262 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF563Q8TA94 476 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 FLVCR1-AS1Q8TAF5 88 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 LRRC3BQ96PB8 259 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CAPN10Q9HC96 672 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF629Q9UEG4 869 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 HCFC2Q9Y5Z7 792 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 POMT1Q9Y6A1 747 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TRAV36DV7A0A075B6V5 113 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 A0A0B4J2A0 478 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 TMEM218A2RU14 115 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 A6NIZ1 184 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 ZNF264O43296 627 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 HLA-DQA2P01906 255 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 APOC1P02654 83 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 CT62P0C5K7 136 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 ATXN8OSP0DMR3 200 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 POU3F2P20265 443 aaPredicted RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 CSRP1P21291 193 aaKnown RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 CXCR1P25024 350 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 GRPRP30550 384 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 NR0B1P51843 470 aaKnown RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 LUMP51884 338 aaPredicted RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 HSD17B7P56937 341 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 RAP1BP61224 184 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 RAP1AP62834 184 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 PPIAP62937 165 aaKnown RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 AIMP2Q13155 320 aaKnown RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 FGL2Q14314 439 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 GRM7Q14831 915 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 TOMM34Q15785 309 aaPredicted RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 ELP2Q6IA86 826 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 PAPD4Q6PIY7 484 aaKnown RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 DEGS2Q6QHC5 323 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 OR2W3Q7Z3T1 314 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 BCORP1Q8N888 145 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 BPIFCQ8NFQ6 507 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 PHOSPHO2Q8TCD6 241 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 MITD1Q8WV92 249 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 METTL21AQ8WXB1 218 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 ATOH1Q92858 354 aaPredicted RBP5.54□□□□□ -1.52
HERC4-209ENST00000473533 SEH1LQ96EE3 360 aa5.54□□□□□ -1.52
HERC4-209ENST00000473533 SAT2Q96F10 170 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms