RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PROX1Q92786 737 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 POLR2J2Q9GZM3 115 aaKnown RBP11.73□□□□□ -0.53
HMGN1-211ENST00000471260 POLR2J3Q9H1A7 115 aaKnown RBP11.73□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF442Q9H7R0 627 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 RPS6KA6Q9UK32 745 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 USP22Q9UPT9 525 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 FKBP7Q9Y680 259 aa11.73□□□□□ -0.53
HMGN1-211ENST00000471260 IGHV4-30-2A0A087WSY4 118 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 CPSF4LA6NMK7 179 aaKnown RBP11.72□□□□□ -0.53
HMGN1-211ENST00000471260 H3BMQ9 156 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 M0R3G1 203 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 CRLF1O75462 422 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 OR6A2O95222 327 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 IFNA14P01570 189 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 ADORA3P0DMS8 318 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 CD247P20963 164 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 AHCYP23526 432 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 CDH15P55291 814 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF74Q16587 644 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 SHQ1Q6PI26 577 aaKnown RBP11.72□□□□□ -0.53
HMGN1-211ENST00000471260 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
HMGN1-211ENST00000471260 FAM168AQ92567 244 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 BORCS5Q969J3 196 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 TAMM41Q96BW9 452 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 FBXO17Q96EF6 278 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF837Q96EG3 531 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-211ENST00000471260 COG8Q96MW5 612 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 TNFRSF13CQ96RJ3 184 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 MYOZ1Q9NP98 299 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-211ENST00000471260 NANSQ9NR45 359 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 MED29Q9NX70 200 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 BAG5Q9UL15 447 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 PCDHGB1Q9Y5G3 927 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
HMGN1-211ENST00000471260 CR1P17927 2039 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 A0A096LNT2 108 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 NDUFS8O00217 210 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 GNGT2O14610 69 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 IGF2P01344 180 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 OR4A8P0C604 315 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 CRHBPP24387 322 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 CXCR4P61073 352 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 TUBA1BP68363 451 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 ADIPOQQ15848 244 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 TUBA1AQ71U36 451 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 OFCC1Q8IZS5 231 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF525Q8N782 197 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 OR4D11Q8NGI4 311 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 OR6N1Q8NGY5 312 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 OR6X1Q8NH79 312 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 VANGL1Q8TAA9 524 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-211ENST00000471260 PYURFQ96I23 114 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 TXNDC15Q96J42 360 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 EMC6Q9BV81 110 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 ULBP2Q9BZM5 246 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 TOR3AQ9H497 397 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 CCNB1IP1Q9NPC3 277 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 TBC1D23Q9NUY8 699 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 FAM118AQ9NWS6 357 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 B3GNT2Q9NY97 397 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF229Q9UJW7 825 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 FBXL3Q9UKT7 428 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 POFUT2Q9Y2G5 429 aa11.71□□□□□ -0.53
HMGN1-211ENST00000471260 ZANQ9Y493 2812 aa11.71□□□□□ -0.54
HMGN1-211ENST00000471260 SH3PXD2BA1X283 911 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 LRRN3E7EW58 273 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 LYPD3O95274 346 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 CH25HO95992 272 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 THY1P04216 161 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 HIST1H2ABP04908 130 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 ASAH2BP0C7U1 165 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 CALCRP30988 508 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 PPOXP50336 477 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 ARHGDIAP52565 204 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 VLDLRP98155 873 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 MVKQ03426 396 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 CAMK2DQ13557 499 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 GSG1Q2KHT4 349 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF691Q5VV52 312 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 CARD17Q5XLA6 110 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 WDR88Q6ZMY6 472 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 HIST3H2AQ7L7L0 130 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 PIWIL3Q7Z3Z3 882 aaKnown RBP11.7□□□□□ -0.54
HMGN1-211ENST00000471260 MDP1Q86V88 176 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 RBM45Q8IUH3 476 aaKnown RBP11.7□□□□□ -0.54
HMGN1-211ENST00000471260 FNDC8Q8TC99 324 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 C10orf105Q8TEF2 133 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 HIST1H2ACQ93077 130 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 MBOAT4Q96T53 435 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 FOXB1Q99853 325 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms