RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SEPHS2Q99611 448 aa17.57■□□□□ 0.4
CPSF7-209ENST00000463244 ZNF426Q9BUY5 554 aa17.57■□□□□ 0.4
CPSF7-209ENST00000463244 MRPL13Q9BYD1 178 aaKnown RBP17.57■□□□□ 0.4
CPSF7-209ENST00000463244 UBAP1Q9NZ09 502 aa17.57■□□□□ 0.4
CPSF7-209ENST00000463244 ANGPT4Q9Y264 503 aa17.57■□□□□ 0.4
CPSF7-209ENST00000463244 USH1CQ9Y6N9 552 aa17.57■□□□□ 0.4
CPSF7-209ENST00000463244 ISPDA4D126 451 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 CPSF4LA6NMK7 179 aaKnown RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 EVPLLA8MZ36 301 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 KPNA4O00629 521 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 MGRN1O60291 552 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 CCNOP22674 350 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 PRTN3P24158 256 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 ZFP36P26651 326 aaKnown RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 WNT5AP41221 380 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 SLC18A1P54219 525 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 PCBP3P57721 371 aaKnown RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 ZNF718Q3SXZ3 478 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 PABPC1L2AQ5JQF8 200 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 SPATA46Q5T0L3 261 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 DOK3Q7L591 496 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 ZNF101Q8IZC7 436 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 DEFB108BQ8NET1 73 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 NOXO1Q8NFA2 376 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 ST7LQ8TDW4 575 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 POP5Q969H6 163 aaKnown RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 MARS2Q96GW9 593 aaKnown RBP17.56■□□□□ 0.4
CPSF7-209ENST00000463244 SLC19A3Q9BZV2 496 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 CCDC167Q9P0B6 97 aa17.56■□□□□ 0.4
CPSF7-209ENST00000463244 PLSCR5A0PG75 271 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 ZSCAN5BA6NJL1 495 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 CENPBD1B2RD01 187 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 HIST1H2ABP04908 130 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 ADH4P08319 380 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 STOMP27105 288 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 GCH1P30793 250 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 MPV17P39210 176 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 ZNF133P52736 654 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 PDLIM3Q53GG5 364 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 THEM4Q5T1C6 240 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 C10orf128Q5T292 105 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 MBNL2Q5VZF2 373 aaKnown RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 HIST3H2AQ7L7L0 130 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 NANOGNBQ7Z5D8 188 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 TSPYL5Q86VY4 417 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 RBM45Q8IUH3 476 aaKnown RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 SYT14Q8NB59 555 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 GPR32P1Q8NGA4 272 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 HIST1H2ACQ93077 130 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 EGLN1Q9GZT9 426 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 ZMAT3Q9HA38 289 aaKnown RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 SIAEQ9HAT2 523 aa17.55■□□□□ 0.4
CPSF7-209ENST00000463244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 LEF1Q9UJU2 399 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-209ENST00000463244 DNAJC9-AS1A6NH13 148 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 FOXH1O75593 365 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 OPN1SWP03999 348 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 UMPSP11172 480 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 PTOV1Q86YD1 416 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 OR4D11Q8NGI4 311 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 SLC25A40Q8TBP6 338 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 KLF14Q8TD94 323 aaPredicted RBP17.54■□□□□ 0.4
CPSF7-209ENST00000463244 ASB10Q8WXI3 467 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 MPP4Q96JB8 637 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 POM121L2Q96KW2 1035 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 DUX5Q96PT3 197 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 CPPED1Q9BRF8 314 aaPredicted RBP17.54■□□□□ 0.4
CPSF7-209ENST00000463244 MMP26Q9NRE1 261 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 CYSLTR2Q9NS75 346 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 PURGQ9UJV8 347 aaKnown RBP17.54■□□□□ 0.4
CPSF7-209ENST00000463244 NUP50Q9UKX7 468 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 SLC7A7Q9UM01 511 aa17.54■□□□□ 0.4
CPSF7-209ENST00000463244 TRAPPC13A5PLN9 417 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 MCIDASD6RGH6 385 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 M0QX08 132 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 POLR3GO15318 223 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 ZNF32P17041 273 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 ATP4BP51164 291 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 MRPS34P82930 218 aaKnown RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 RPL18Q07020 188 aaKnown RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 ARMCX4Q5H9R4 360 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 TREML4Q6UXN2 200 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 UNQ6126/PRO20091Q6UXV3 157 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 DLEU7Q6UYE1 221 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 C11orf65Q8NCR3 313 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 NABP1Q96AH0 204 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 C1orf147Q96MC9 270 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 OR2J1Q9GZK6 312 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 PCDHAC1Q9H158 963 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 KCNN2Q9H2S1 579 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 UNKLQ9H9P5 680 aaKnown RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 CCNB1IP1Q9NPC3 277 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 MEPEQ9NQ76 525 aaPredicted RBP17.53■□□□□ 0.4
CPSF7-209ENST00000463244 NKIRAS1Q9NYS0 192 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 PLEK2Q9NYT0 353 aa17.53■□□□□ 0.4
CPSF7-209ENST00000463244 EIF3KQ9UBQ5 218 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms