RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CHIT1Q13231 466 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ZNF273Q14593 569 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 TSNQ15631 228 aaKnown RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 NNATQ16517 81 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 OR5M10Q6IEU7 315 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 OR52E8Q6IFG1 317 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 FAM45BPQ6NSW5 357 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ZNF544Q6NX49 715 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 NPSR1Q6W5P4 371 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 SSX8Q7RTT4 187 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 NUFIP2Q7Z417 695 aaKnown RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 GALNT10Q86SR1 603 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ADAMTSL2Q86TH1 951 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 MUC15Q8N387 334 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 STPG4Q8N801 248 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 BANPQ8N9N5 519 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 FAM45AQ8TCE6 357 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ZNF675Q8TD23 568 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ANKRD49Q8WVL7 239 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 TMBIM1Q969X1 311 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 SPSB1Q96BD6 273 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 VSTM2LQ96N03 204 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ZNF681Q96N22 645 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 COL21A1Q96P44 957 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 LYSTQ99698 3801 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 CPNE1Q99829 537 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 LAT2Q9GZY6 243 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 STMN4Q9H169 189 aaPredicted RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 DSN1Q9H410 356 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 Q9N2K0 584 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 PAQR5Q9NXK6 330 aaPredicted RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 PTTG2Q9NZH5 202 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.06□□□□□ -1.76
COPS3-204ENST00000462236 DKKL1Q9UK85 242 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 CLEC4AQ9UMR7 237 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 PLLPQ9Y342 182 aa4.06□□□□□ -1.76
COPS3-204ENST00000462236 A0A0J9YW62 118 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 LOC390937A0A1W2PQ73 354 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ANXA2P2A6NMY6 339 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 SAP18O00422 153 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 ABCD4O14678 606 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ZNF500O60304 480 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 SH3BGRLO75368 114 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 TPM3P06753 285 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 CSN3P07498 182 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 TPM1P09493 284 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 NT5EP21589 574 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 MPZP25189 248 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 PIK3R1P27986 724 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 IL2RGP31785 369 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 EVI2BP34910 448 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 XKP51811 444 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 MAPK12P53778 367 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 CTBP2P56545 445 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 GPX6P59796 221 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 IRF8Q02556 426 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 CAMK2DQ13557 499 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 GGTLC2Q14390 218 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 EXOSC7Q15024 291 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 PPA1Q15181 289 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 SPA17Q15506 151 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 PDK4Q16654 411 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ODF4Q2M2E3 257 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 UGT3A2Q3SY77 523 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 TRMT12Q53H54 448 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 FBXO48Q5FWF7 155 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 PAGE2BQ5JRK9 111 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 C6orf136Q5SQH8 315 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 TIMM23BQ5SRD1 257 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 SEL1L2Q5TEA6 688 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 RAET1LQ5VY80 246 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 SULT1C3Q6IMI6 304 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 MED27Q6P2C8 311 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 RBMS3Q6XE24 437 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 Q6ZT83 130 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 BHLHA15Q7RTS1 189 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 TRPT1Q86TN4 253 aaKnown RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 ISCA2Q86U28 154 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 P2RY8Q86VZ1 359 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 NR2C2APQ86WQ0 139 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 SYCE1Q8N0S2 351 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ZNF619Q8N2I2 560 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 TCAIMQ8N3R3 496 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 NKAIN3Q8N8D7 197 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 NAT8LQ8N9F0 302 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ZBTB8BQ8NAP8 495 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 OR4K17Q8NGC6 315 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 OR4K14Q8NGD5 310 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 OR52B6Q8NGF0 335 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 OR5M1Q8NGP8 315 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 OR10D3Q8NH80 312 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 LRRC8CQ8TDW0 803 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 UBTD2Q8WUN7 234 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 PHLDA1Q8WV24 401 aaPredicted RBP4.05□□□□□ -1.76
COPS3-204ENST00000462236 UBE2E3Q969T4 207 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 ESAMQ96AP7 390 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
COPS3-204ENST00000462236 FOXN4Q96NZ1 517 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms