RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PEX5LQ8IYB4 626 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 ANKFN1Q8N957 763 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 SLC38A5Q8WUX1 472 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 FAM162AQ96A26 154 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 TMEM19Q96HH6 336 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 C1orf147Q96MC9 270 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-202ENST00000461127 MMP27Q9H306 513 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 B3GAT2Q9NPZ5 323 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 SLCO1C1Q9NYB5 712 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 ACTR3BQ9P1U1 418 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 ZNF69Q9UC07 566 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 TESQ9UGI8 421 aaKnown RBP14.65□□□□□ -0.06
TOP3A-202ENST00000461127 POFUT2Q9Y2G5 429 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 CMYA5Q8N3K9 4069 aa14.65□□□□□ -0.06
TOP3A-202ENST00000461127 PPIAL4EA0A075B759 164 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 PPIAL4CA0A0B4J2A2 164 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 A0A1B0GUS0 222 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 PRAMEF27A3QJZ7 478 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 PPIAL4DF5H284 164 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 M0QZ24 198 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 FOXH1O75593 365 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 MT-ND5P03915 603 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 PPIAL4FP0DN26 164 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 RPS4Y1P22090 263 aaKnown RBP14.64□□□□□ -0.07
TOP3A-202ENST00000461127 AQP1P29972 269 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 GIPRP48546 466 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 RAB1AP62820 205 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 MS4A2Q01362 244 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 SYPL1Q16563 259 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 CYP2R1Q6VVX0 501 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 C17orf107Q6ZR85 190 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 USP51Q70EK9 711 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 BBS10Q8TAM1 723 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 NSMCE2Q96MF7 247 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 ZNF75AQ96N20 296 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 OR2M2Q96R28 347 aa14.64□□□□□ -0.07
TOP3A-202ENST00000461127 CACYBPQ9HB71 228 aaKnown RBP14.64□□□□□ -0.07
TOP3A-202ENST00000461127 ISPDA4D126 451 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 FTCDNL1E5RQL4 147 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 NPIPB7O75200 414 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 ALX3O95076 343 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 UBL3O95164 117 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 KNG1P01042 644 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 RPS5P46782 204 aaKnown RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 CAMK2DQ13557 499 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 MOGQ16653 247 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 LRRC23Q53EV4 343 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 RPS26P11Q5JNZ5 115 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 LCN8Q6JVE9 175 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 PATL1Q86TB9 770 aaKnown RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 SPATA24Q86W54 205 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 KRT73Q86Y46 540 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 TMEM123Q8N131 208 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 BHLHE22Q8NFJ8 381 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 SYNPRQ8TBG9 265 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 TMIGD2Q96BF3 282 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 ZNF607Q96SK3 696 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 SAP30LQ9HAJ7 183 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 UBAP1Q9NZ09 502 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 B3GAT1Q9P2W7 334 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 RRP15Q9Y3B9 282 aaKnown RBP14.63□□□□□ -0.07
TOP3A-202ENST00000461127 MMP24Q9Y5R2 645 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 AUP1Q9Y679 476 aa14.63□□□□□ -0.07
TOP3A-202ENST00000461127 A0A0G2JPF8 293 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 CDHR4A6H8M9 788 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 HNRNPCL2B2RXH8 293 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 HNRNPCL3B7ZW38 293 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 ACOT8O14734 319 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 CLPTM1O96005 669 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 IFNA14P01570 189 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 HNRNPCL4P0DMR1 293 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 B4GALT1P15291 398 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 ATP6V1B2P21281 511 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 ACAA2P42765 397 aaKnown RBP14.62□□□□□ -0.07
TOP3A-202ENST00000461127 MTNR1AP48039 350 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 KPNB1Q14974 876 aaKnown RBP14.62□□□□□ -0.07
TOP3A-202ENST00000461127 SLC9A3R2Q15599 337 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 MTX3Q5HYI7 312 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 CARD17Q5XLA6 110 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 SPATC1Q76KD6 591 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 ZNF627Q7L945 461 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 SLC26A7Q8TE54 656 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 ELMOD3Q96FG2 381 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 RSRC1Q96IZ7 334 aaKnown RBP14.62□□□□□ -0.07
TOP3A-202ENST00000461127 MS4A7Q9GZW8 240 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-202ENST00000461127 GORASP2Q9H8Y8 452 aa14.62□□□□□ -0.07
TOP3A-202ENST00000461127 TIMM23O14925 209 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 TRAF3IP2O43734 574 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-202ENST00000461127 SERPINB7O75635 380 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 SERPINA1P01009 418 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 KDELR2P33947 212 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 SLC3A1Q07837 685 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 RAB39AQ14964 217 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 MFSD13AQ14CX5 517 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 LIN52Q52LA3 116 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 C20orf196Q8IYI0 205 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 C10orf67Q8IYJ2 551 aa14.61□□□□□ -0.07
TOP3A-202ENST00000461127 BCL6BQ8N143 479 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms