RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SLC35G6P0C7Q6 338 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SEC11BP0C7V7 166 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LIMS3P0CW19 117 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LIMS4P0CW20 117 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PRDX3P30048 256 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 MDH2P40926 338 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 OPRD1P41143 372 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CDKN1BP46527 198 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NCBP2P52298 156 aaKnown RBP eCLIP2.03□□□□□ -2.08
USP53-202ENST00000450251 CASP6P55212 293 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ACTR1AP61163 376 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 DGCR2P98153 550 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ELAVL2Q12926 359 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 KLF9Q13886 244 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 FZD2Q14332 565 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 IL13RA2Q14627 380 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ELOBQ15370 118 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF79Q15937 498 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 AMZ1Q400G9 498 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 EOGTQ5NDL2 527 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CLEC12AQ5QGZ9 265 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF468Q5VIY5 522 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 BRICD5Q6PL45 260 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SUSD1Q6UWL2 747 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FAM151BQ6UXP7 276 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 DLEU7Q6UYE1 221 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF813Q6ZN06 617 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SERPINA9Q86WD7 417 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CALHM3Q86XJ0 350 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF695Q8IW36 515 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TMEM130Q8N3G9 435 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FAM24BQ8N5W8 94 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CSNK1A1LQ8N752 337 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZSCAN4Q8NAM6 433 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 OR10AD1Q8NGE0 317 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR52L2PQ8NGH6 319 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR6K6Q8NGW6 343 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PCNPQ8WW12 178 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 TMED6Q8WW62 240 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 XAGE5Q8WWM1 108 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TFGQ92734 400 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 PLD4Q96BZ4 506 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF514Q96K75 400 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 C12orf42Q96LP6 360 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SMOC1Q9H4F8 434 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SRA1Q9HD15 236 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ENY2Q9NPA8 101 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MBNL1Q9NR56 388 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ADARB2Q9NS39 739 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 GNG13Q9P2W3 67 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TMEFF2Q9UIK5 374 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 KCNE5Q9UJ90 142 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FOCADQ5VW36 1801 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NHSQ6T4R5 1651 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 IGLV3-22A0A075B6J6 115 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 hCG_1809904A0A1W2PP81 198 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 A0A1W2PR64 198 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 A0A1W2PRV1 198 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SERTM1A2A2V5 107 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SMIM30A4D0T7 59 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PMS2P1A4D2B8 440 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 DHRS7CA6NNS2 312 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LOC730098B7Z3J9 87 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 AQP7O14520 342 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TLX3O43711 291 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 TBX18O95935 607 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KNG1P01042 644 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PDGFBP01127 241 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 IGHV2-70P01814 119 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OPN1SWP03999 348 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HPNP05981 417 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CHRM2P08172 466 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 AMD1P17707 334 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 F2RP25116 425 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ELAVL4P26378 380 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 HTR5AP47898 357 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SLC6A11P48066 632 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CLDN6P56747 220 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MAXP61244 160 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NHLH1Q02575 133 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FPGSQ05932 587 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HSPB3Q12988 150 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ITPRIPL2Q3MIP1 535 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FAM74A1Q5RGS3 127 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MORN1Q5T089 497 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HLA-DQA1Q5Y7H0 255 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ADGRA1Q86SQ6 560 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TGIF2LYQ8IUE0 185 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SP8Q8IXZ3 490 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF100Q8IYN0 542 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CMTM1Q8IZ96 169 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LGI3Q8N145 548 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PRSS35Q8N3Z0 413 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LRRC18Q8N456 261 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 BOLLQ8N9W6 283 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 OR5AU1Q8NGC0 362 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR10P1Q8NGE3 313 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR4D6Q8NGJ1 314 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR2G3Q8NGZ4 309 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 EMG1Q92979 244 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms