RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 IGHV3-13P01766 116 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 LAMP1P11279 417 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 IL12AP29459 219 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 ANXA11P50995 505 aaKnown RBP10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 ERVS71-1P61550 626 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 KCNJ10P78508 379 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 GLO1Q04760 184 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 BNIP1Q12981 228 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 PGS1Q32NB8 556 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 KLHL22Q53GT1 634 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 OR4F3Q6IEY1 312 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 HACD2Q6Y1H2 254 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 RNF130Q86XS8 419 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 OIT3Q8WWZ8 545 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 ROPN1LQ96C74 230 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 NSL1Q96IY1 281 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 TEX37Q96LM6 180 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 PANX1Q96RD7 426 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 RAD21L1Q9H4I0 556 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 TMEM165Q9HC07 324 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 POFUT2Q9Y2G5 429 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 LRCH1Q9Y2L9 728 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 AP3M1Q9Y2T2 418 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 PCDHGB5Q9Y5G0 923 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 GMEB1Q9Y692 573 aa10.52□□□□□ -0.73
AC004540.1-204ENST00000449537 A0A096LPI6 279 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 IGHV2-70DA0A0C4DH43 119 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 TNFRSF13BO14836 293 aaPredicted RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 DNAJC8O75937 253 aaPredicted RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 UBL3O95164 117 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 MATN1P21941 496 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 UQCRC2P22695 453 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 NME5P56597 212 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 MXRA7P84157 204 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 C1DQ13901 141 aaKnown RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 LRIF1Q5T3J3 769 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 C16orf62Q7Z3J2 963 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 SNX32Q86XE0 403 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 FUNDC1Q8IVP5 155 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 ICA1LQ8NDH6 482 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 OR4S1Q8NGB4 309 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 CNOT9Q92600 299 aaKnown RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 SH3GL1Q99961 368 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 SSBP3Q9BWW4 388 aaPredicted RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF350Q9GZX5 532 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 EFCAB1Q9HAE3 211 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 GID8Q9NWU2 228 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 THUMPD1Q9NXG2 353 aaKnown RBP10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF224Q9NZL3 707 aa10.51□□□□□ -0.73
AC004540.1-204ENST00000449537 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 CLDN24A6NM45 220 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 MRASO14807 208 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 ANP32DO95626 131 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 WNT2P09544 360 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 COX4I1P13073 169 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 IER3P46695 156 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 UCP2P55851 309 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 RPS26P62854 115 aaKnown RBP10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 GNB2P62879 340 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 FADDQ13158 208 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 MFSD13AQ14CX5 517 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 DNAL1Q4LDG9 190 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 PHYHD1Q5SRE7 291 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 C6orf10Q5SRN2 563 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 DHRS7BQ6IAN0 325 aaPredicted RBP10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF627Q7L945 461 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 DHDDSQ86SQ9 333 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF584Q8IVC4 421 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 SLC30A7Q8NEW0 376 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 OR4A15Q8NGL6 344 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 ZG16BQ96DA0 208 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 OXGR1Q96P68 337 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 B9D2Q9BPU9 175 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 BCL2L14Q9BZR8 327 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 CDH20Q9HBT6 801 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 KIF17Q9P2E2 1029 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 WDR45Q9Y484 360 aa10.5□□□□□ -0.73
AC004540.1-204ENST00000449537 A8MVM7 634 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 KRT75O95678 551 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 C6orf47O95873 294 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 AGR2O95994 175 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 TFPTP0C1Z6 253 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 PATE4P0C8F1 98 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 CCL2P13500 99 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 UQCRBP14927 111 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 B4GALT1P15291 398 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 CPT2P23786 658 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 PCBP3P57721 371 aaKnown RBP10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 BTG1P62324 171 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 HBA1P69905 142 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 BNIP2Q12982 314 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms