RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 CPSF4LA6NMK7 179 aaKnown RBP20.65■□□□□ 0.9
PMS1-214ENST00000446877 KPNA4O00629 521 aaPredicted RBP20.65■□□□□ 0.9
PMS1-214ENST00000446877 UBOX5O94941 541 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 VIMP08670 466 aaKnown RBP20.65■□□□□ 0.9
PMS1-214ENST00000446877 LIPAP38571 399 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 PABPC1L2AQ5JQF8 200 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 ENTPD8Q5MY95 495 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 SPATA46Q5T0L3 261 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 LRRC58Q96CX6 371 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 SPDL1Q96EA4 605 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 ZNF347Q96SE7 839 aa20.65■□□□□ 0.9
PMS1-214ENST00000446877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.65■□□□□ 0.9
PMS1-214ENST00000446877 LEF1Q9UJU2 399 aaPredicted RBP20.65■□□□□ 0.9
PMS1-214ENST00000446877 A0A1W2PRG6 482 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 MCIDASD6RGH6 385 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 BLOC1S5-TXNDC5H3BN57 136 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 MMP7P09237 267 aaPredicted RBP20.64■□□□□ 0.89
PMS1-214ENST00000446877 GPX2P18283 190 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 MMP15P51511 669 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 BAMBIQ13145 260 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 HIST3H3Q16695 136 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 BLOC1S3Q6QNY0 202 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 NANOGNBQ7Z5D8 188 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 SYT14Q8NB59 555 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 IPCEF1Q8WWN9 437 aaPredicted RBP20.64■□□□□ 0.89
PMS1-214ENST00000446877 ARHGDIGQ99819 225 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 C1QTNF5Q9BXJ0 243 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 UNKLQ9H9P5 680 aaKnown RBP20.64■□□□□ 0.89
PMS1-214ENST00000446877 SIAEQ9HAT2 523 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 PURGQ9UJV8 347 aaKnown RBP20.64■□□□□ 0.89
PMS1-214ENST00000446877 AUP1Q9Y679 476 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 GMEB1Q9Y692 573 aa20.64■□□□□ 0.89
PMS1-214ENST00000446877 C5orf49A4QMS7 147 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 DNAJC9-AS1A6NH13 148 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 POM121CA8CG34 1229 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 SBK2P0C263 348 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 ZFP36P26651 326 aaKnown RBP20.63■□□□□ 0.89
PMS1-214ENST00000446877 GDI2P50395 445 aaKnown RBP20.63■□□□□ 0.89
PMS1-214ENST00000446877 PAGE3Q5JUK9 113 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 HDDC2Q7Z4H3 204 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 C1orf174Q8IYL3 243 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 OR6T1Q8NGN1 323 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 MARS2Q96GW9 593 aaKnown RBP20.63■□□□□ 0.89
PMS1-214ENST00000446877 MPP4Q96JB8 637 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 DIRC2Q96SL1 478 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 SLC19A3Q9BZV2 496 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 NKIRAS1Q9NYS0 192 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 PLEK2Q9NYT0 353 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 CCDC167Q9P0B6 97 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 ZNF69Q9UC07 566 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 ZDHHC8Q9ULC8 765 aa20.63■□□□□ 0.89
PMS1-214ENST00000446877 CENPBD1B2RD01 187 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 ASAH2BP0C7U1 165 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 MPV17P39210 176 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 MRPL19P49406 292 aaKnown RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 IL13RA1P78552 427 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 DUSP7Q16829 419 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 ZMAT1Q5H9K5 638 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 MBNL2Q5VZF2 373 aaKnown RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 EPGNQ6UW88 154 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 FUNDC1Q8IVP5 155 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 ZNF101Q8IZC7 436 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 DEFB108BQ8NET1 73 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 NOXO1Q8NFA2 376 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 SLC25A40Q8TBP6 338 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 KLF14Q8TD94 323 aaPredicted RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 ADAMTS16Q8TE57 1224 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 SLC25A28Q96A46 364 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 DCLRE1CQ96SD1 692 aaKnown RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 MRPL13Q9BYD1 178 aaKnown RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 IKZF5Q9H5V7 419 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 MMP26Q9NRE1 261 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 CGGBP1Q9UFW8 167 aaPredicted RBP20.62■□□□□ 0.89
PMS1-214ENST00000446877 SLC7A7Q9UM01 511 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 NPTNQ9Y639 398 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 USH1CQ9Y6N9 552 aa20.62■□□□□ 0.89
PMS1-214ENST00000446877 TRAPPC13A5PLN9 417 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 ZSCAN5BA6NJL1 495 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 POLR3GO15318 223 aaPredicted RBP20.61■□□□□ 0.89
PMS1-214ENST00000446877 WNT5AP41221 380 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 DAP3P51398 398 aaKnown RBP20.61■□□□□ 0.89
PMS1-214ENST00000446877 ZNF154Q13106 437 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 KLHL36Q8N4N3 616 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 SPICQ8N5J4 248 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 C11orf65Q8NCR3 313 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 VANGL1Q8TAA9 524 aaPredicted RBP20.61■□□□□ 0.89
PMS1-214ENST00000446877 GEMIN6Q8WXD5 167 aaKnown RBP20.61■□□□□ 0.89
PMS1-214ENST00000446877 POM121L2Q96KW2 1035 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 MRI1Q9BV20 369 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 OR2J1Q9GZK6 312 aa20.61■□□□□ 0.89
PMS1-214ENST00000446877 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.61■□□□□ 0.89
PMS1-214ENST00000446877 V9GYY5 206 aaPredicted RBP20.61■□□□□ 0.89
PMS1-214ENST00000446877 M0QX08 132 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 IGHMP01871 453 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 F13BP05160 661 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 ADH4P08319 380 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 ACADSP16219 412 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 ZNF32P17041 273 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 CDAP32320 146 aa20.6■□□□□ 0.89
PMS1-214ENST00000446877 MRPS34P82930 218 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms