RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 DDX6P26196 483 aaKnown RBP eCLIP9.08□□□□□ -0.96
CASP4-203ENST00000444739 AVPR2P30518 371 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 SDHAP31040 664 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 ID2Q02363 134 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 AIMP2Q13155 320 aaKnown RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 ODF4Q2M2E3 257 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.08□□□□□ -0.96
CASP4-203ENST00000444739 TMEM200AQ86VY9 491 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 OR52E1Q8NGJ3 308 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 OR10R2Q8NGX6 335 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 HIST1H2BAQ96A08 127 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 FOXRED1Q96CU9 486 aaPredicted RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 NKX3-1Q99801 234 aaPredicted RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 TCEAL7Q9BRU2 100 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 RAB11FIP5Q9BXF6 653 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 CST11Q9H112 138 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 SEC61A2Q9H9S3 476 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 RHOFQ9HBH0 211 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 MKKSQ9NPJ1 570 aaPredicted RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 TMEM74BQ9NUR3 256 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 METTL1Q9UBP6 276 aaKnown RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 LPAR3Q9UBY5 353 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 ZNF107Q9UII5 783 aaPredicted RBP9.08□□□□□ -0.96
CASP4-203ENST00000444739 WNT6Q9Y6F9 365 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 MPDZO75970 2070 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 DOCK9Q9BZ29 2069 aa9.08□□□□□ -0.96
CASP4-203ENST00000444739 TRBV6-7A0A0A0MS04 114 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 C9orf170A2RU37 121 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 LATO43561 262 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 S100A6P06703 90 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 CRHP06850 196 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ZNF28P17035 718 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 RCC1P18754 421 aaPredicted RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 AGAP20933 346 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 GABRA3P34903 492 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 PBX2P40425 430 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 KIR3DL2P43630 455 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 PPT1P50897 306 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 CAV2P51636 162 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 SLC25A1P53007 311 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 RPS4XP62701 263 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 RUNX2Q13950 521 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 RBM39Q14498 530 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 ELOCQ15369 112 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ASPHD2Q6ICH7 369 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ULK3Q6PHR2 472 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 RHOUQ7L0Q8 258 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ZNF614Q8N883 585 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 NUDCD2Q8WVJ2 157 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 MRGPRFQ96AM1 343 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 C14orf79Q96F83 325 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 RRNAD1Q96FB5 475 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 SLC41A2Q96JW4 573 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 GPX7Q96SL4 187 aaPredicted RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 SLCO5A1Q9H2Y9 848 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 POLE3Q9NRF9 147 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 SLC2A8Q9NY64 477 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 KLK13Q9UKR3 277 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 IKZF2Q9UKS7 526 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 FARSAQ9Y285 508 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 CSAG2Q9Y5P2 127 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 A0A087WV62 115 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 EEF1E1-BLOC1S5C9J1V9 151 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 HTR3BO95264 441 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 CISD3P0C7P0 127 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 APEHP13798 732 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 PSMB6P28072 239 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 AQP2P41181 271 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 F2RL1P55085 397 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 HGFACQ04756 655 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 COL19A1Q14993 1142 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 EXOSC7Q15024 291 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 ELAVL1Q15717 326 aaKnown RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 RNF212Q495C1 297 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ZNF627Q7L945 461 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 DCUN1D4Q92564 292 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 FBXO17Q96EF6 278 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 C4orf45Q96LM5 186 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 LMF1Q96S06 567 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 CLCC1Q96S66 551 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 PHB2Q99623 299 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 NAA11Q9BSU3 229 aaPredicted RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 TRPM6Q9BX84 2022 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 TEX101Q9BY14 249 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 CHMP1AQ9HD42 196 aaPredicted RBP9.07□□□□□ -0.96
CASP4-203ENST00000444739 PCDHGA1Q9Y5H4 931 aa9.07□□□□□ -0.96
CASP4-203ENST00000444739 HEATR5AQ86XA9 2040 aa9.06□□□□□ -0.96
CASP4-203ENST00000444739 A0A1W2PPC1 479 aa9.06□□□□□ -0.96
CASP4-203ENST00000444739 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
CASP4-203ENST00000444739 RNASEK-C17orf49H0YIS7 233 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms