RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 CLEC2AQ6UVW9 174 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 SLC30A7Q8NEW0 376 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 BCAS4Q8TDM0 211 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 Q96M85 177 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 VRK1Q99986 396 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-217ENST00000439669 MUC13Q9H3R2 512 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 PLK3Q9H4B4 646 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 SIAEQ9HAT2 523 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 CCNB1IP1Q9NPC3 277 aa20.76■□□□□ 0.91
CPNE1-217ENST00000439669 A0A1W2PPL8 197 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 MGRN1O60291 552 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 LY6G6DO95868 133 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 EFNA4P52798 201 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 HSF2Q03933 536 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 PLP2Q04941 152 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 MTX3Q5HYI7 312 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 DHFR2Q86XF0 187 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 SVOPLQ8N434 492 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 NABP1Q96AH0 204 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 RHNO1Q9BSD3 238 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 REG4Q9BYZ8 158 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 CDH20Q9HBT6 801 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 IL20RAQ9UHF4 553 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 TMCC3Q9ULS5 477 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 PRPF19Q9UMS4 504 aaKnown RBP20.75■□□□□ 0.91
CPNE1-217ENST00000439669 CMAHPQ9Y471 501 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 FKBP7Q9Y680 259 aa20.75■□□□□ 0.91
CPNE1-217ENST00000439669 TEX13CA0A0J9YWL9 993 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 IQCMA0A1B0GVH7 501 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 GPRIN2O60269 458 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 OR10H3O60404 316 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 PTP4A3O75365 173 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 PTHP01270 115 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 GUCA1AP43080 201 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-217ENST00000439669 KRR1Q13601 381 aaKnown RBP20.74■□□□□ 0.91
CPNE1-217ENST00000439669 MESTQ5EB52 335 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 ARFGEF3Q5TH69 2177 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 THSD4Q6ZMP0 1018 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 DNM1P46Q6ZS02 220 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 TRPM8Q7Z2W7 1104 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 FAM122BQ7Z309 247 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 ZNF525Q8N782 197 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 MAPK1IP1LQ8NDC0 245 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 RASD2Q96D21 266 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 SORCS2Q96PQ0 1159 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 C1orf198Q9H425 327 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 SLC7A8Q9UHI5 535 aa20.74■□□□□ 0.91
CPNE1-217ENST00000439669 LY6HO94772 140 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 HEXAP06865 529 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 CCL2P13500 99 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 DSCR9P59020 149 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 RPS23P62266 143 aaKnown RBP20.73■□□□□ 0.91
CPNE1-217ENST00000439669 TBC1D28Q2M2D7 210 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 LCN8Q6JVE9 175 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 ZER1Q7Z7L7 766 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 FANK1Q8TC84 345 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 CCDC124Q96CT7 223 aaKnown RBP20.73■□□□□ 0.91
CPNE1-217ENST00000439669 GPX7Q96SL4 187 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-217ENST00000439669 GPA33Q99795 319 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 DYNLRB1Q9NP97 96 aa20.73■□□□□ 0.91
CPNE1-217ENST00000439669 IGHV4-30-2A0A087WSY4 118 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 SLC22A23A1A5C7 686 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 MMP7P09237 267 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-217ENST00000439669 ZNF32P17041 273 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 SDHAP31040 664 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 GLRXP35754 106 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 IFNGR2P38484 337 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 PPOXP50336 477 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 TRIM25Q14258 630 aaKnown RBP20.72■□□□□ 0.91
CPNE1-217ENST00000439669 PABPC1L2AQ5JQF8 200 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 GPR139Q6DWJ6 353 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 OR1J2Q8NGS2 313 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 MRPL24Q96A35 216 aaKnown RBP20.72■□□□□ 0.91
CPNE1-217ENST00000439669 LRMDAQ9H2I8 198 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 NRIP3Q9NQ35 241 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 TAS2R1Q9NYW7 299 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 FBXO9Q9UK97 447 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-217ENST00000439669 IER3IP1Q9Y5U9 82 aa20.72■□□□□ 0.91
CPNE1-217ENST00000439669 C2CD3Q4AC94 2353 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 TCRBV5S2A0A599 114 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 PRSS37A4D1T9 235 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 SOCS2O14508 198 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 STAMBPO95630 424 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 F12P00748 615 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-217ENST00000439669 FAM157BP0CG42 384 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 LAP3P28838 519 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 APLNRP35414 380 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 FXYD6P3P58550 94 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 MS4A2Q01362 244 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 FAM27BQ5VT28 67 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 SMARCD3Q6STE5 483 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 DPY19L2P2Q6ZN68 376 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 PAQR4Q8N4S7 273 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-217ENST00000439669 FAM168AQ92567 244 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 CLPTM1LQ96KA5 538 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 LRGUKQ96M69 825 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 DOK1Q99704 481 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 SYT3Q9BQG1 590 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 THTPAQ9BU02 230 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 C1orf21Q9H246 121 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms