RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 SIRPAP78324 504 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 CDK3Q00526 305 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 MEF2AQ02078 507 aaPredicted RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 PJVKQ0ZLH3 352 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 INPP5JQ15735 1006 aaPredicted RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 C4orf46Q504U0 113 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 NKAPLQ5M9Q1 402 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 CDCP2Q5VXM1 449 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 RPL22L1Q6P5R6 122 aaKnown RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 IGF2-ASQ6U949 168 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 GDF7Q7Z4P5 450 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 TAF8Q7Z7C8 310 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 DCUN1D3Q8IWE4 304 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 GTPBP8Q8N3Z3 284 aaPredicted RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 OR52L1Q8NGH7 329 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 CCDC107Q8WV48 283 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 EXOSC8Q96B26 276 aaKnown RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 SMAD5Q99717 465 aaKnown RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 CHST6Q9GZX3 395 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 TMPRSS5Q9H3S3 457 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 TMEM27Q9HBJ8 222 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 TREM1Q9NP99 234 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 NOX4Q9NPH5 578 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 KRCC1Q9NPI7 259 aaPredicted RBP6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 POLE3Q9NRF9 147 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 C5AR2Q9P296 337 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 V9GY05 133 aa6.99□□□□□ -1.29
CNKSR3-202ENST00000433165 C17orf113A0A1B0GUU1 675 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 C9orf170A2RU37 121 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GGT3PA6NGU5 568 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 DBX1A6NMT0 343 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GPR37O15354 613 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 PPIHO43447 177 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 C1orf105O95561 183 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 MT-ND4LP03901 98 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 ANXA2P07355 339 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 AKAIN1P0CW23 69 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 APEHP13798 732 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 MPIP34949 423 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 HTR5AP47898 357 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 INSM1Q01101 510 aaPredicted RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 DEFA6Q01524 100 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 NAAAQ02083 359 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 DEFB133Q30KQ1 61 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GFOD2Q3B7J2 385 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 TP53I3Q53FA7 332 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 FAM76BQ5HYJ3 339 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 DRAM2Q6UX65 266 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 TMEM64Q6YI46 380 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 NDUFAF7Q7L592 441 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 TMEM200AQ86VY9 491 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 VRK2Q86Y07 508 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 ZNF740Q8NDX6 193 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SLC30A7Q8NEW0 376 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 STEAP2Q8NFT2 490 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OR5AP2Q8NGF4 316 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OR51S1Q8NGJ8 323 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SLC41A3Q96GZ6 507 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RBM14Q96PK6 669 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 PFDN5Q99471 154 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GAL3ST1Q99999 423 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GLIPR2Q9H4G4 154 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OPA3Q9H6K4 179 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SEC61A2Q9H9S3 476 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 ZCCHC3Q9NUD5 404 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 POT1Q9NUX5 634 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SLC13A4Q9UKG4 626 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SLC17A4Q9Y2C5 497 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OR1A2Q9Y585 309 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 UNC119BA6NIH7 251 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RHPN2P1A8MT19 583 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 F5H0A9 414 aaPredicted RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 XRCC3O43542 346 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OR4E1P0C645 316 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RNF224P0DH78 156 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GIMD1P0DJR0 217 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 GLB1P16278 677 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 HLA-GP17693 338 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SPINK2P20155 84 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 CERS1P27544 350 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SDHAP31040 664 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RIDAP52758 137 aaKnown RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 CLDN12P56749 244 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 SCAND1P57086 179 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 HGFACQ04756 655 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 TMEM115Q12893 351 aaPredicted RBP6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 MST1LQ2TV78 715 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 C14orf28Q4W4Y0 310 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 ZNF542PQ5EBM4 170 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 LIPNQ5VXI9 398 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RPL13AP3Q6NVV1 102 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 ZCCHC12Q6PEW1 402 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 OGFOD3Q6PK18 319 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 BEND4Q6ZU67 534 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RD3Q7Z3Z2 195 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 HSD11B1LQ7Z5J1 315 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 RFLNBQ8N5W9 214 aa6.98□□□□□ -1.29
CNKSR3-202ENST00000433165 TRAM1L1Q8N609 369 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms