RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CAMK2BQ13554 666 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
CNOT4-206ENST00000428680 DPPA2Q7Z7J5 298 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 OR5H2Q8NGV7 314 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 COQ8AQ8NI60 647 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 KCNK17Q96T54 332 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 FN3KRPQ9HA64 309 aa6.57□□□□□ -1.36
CNOT4-206ENST00000428680 SIDT1Q9NXL6 827 aaKnown RBP6.57□□□□□ -1.36
CNOT4-206ENST00000428680 A0A1B0GVC2 190 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 OR2A25A4D2G3 310 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 H7C1Q1 480 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 DHHO43323 396 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 MT-CO2P00403 227 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GYPBP06028 91 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GUSBP08236 651 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 PRR35P0CG20 571 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 EIF4EBP2Q13542 120 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SBSNQ6UWP8 590 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 LSRQ86X29 649 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 LINC00346Q8IVM7 164 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GABRG1Q8N1C3 465 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SLC25A45Q8N413 288 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 PTPMT1Q8WUK0 201 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 STON2Q8WXE9 905 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF251Q9BRH9 671 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 WDR54Q9H977 334 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GALNT9Q9HCQ5 603 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SLC22A11Q9NSA0 550 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 ACOT8O14734 319 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 IFNA5P01569 189 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 BRS3P32247 399 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 IST1P53990 364 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GRB2P62993 217 aaKnown RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 RPP30P78346 268 aaKnown RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 TNFAIP6P98066 277 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 FOXF1Q12946 379 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 INPP5JQ15735 1006 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 MPEG1Q2M385 716 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 BEX5Q5H9J7 111 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 TMEM65Q6PI78 240 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 BHLHA15Q7RTS1 189 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 RNF113BQ8IZP6 322 aaKnown RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 FAM71CQ8NEG0 241 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 MBOAT4Q96T53 435 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 S1PR3Q99500 378 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 TMEM59Q9BXS4 323 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 POTEKPQ9BYX7 375 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 EBF2Q9HAK2 575 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 MRPS18BQ9Y676 258 aaKnown RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 DOPEY1Q5JWR5 2465 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 LOC100130705A0A1B0GUX0 176 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 PLOD2O00469 737 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 DEGS1O15121 323 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SLC19A2O60779 497 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 TRMUO75648 421 aaKnown RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 FURINP09958 794 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 HTR1EP28566 365 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 DYRK1AQ13627 763 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 PLAG1Q6DJT9 500 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 TOMM5Q8N4H5 51 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 NUP37Q8NFH4 326 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 OR10D3Q8NH80 312 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 FNDC9Q8TBE3 224 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GSTO2Q9H4Y5 243 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 LAMP3Q9UQV4 416 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 A6NHS1 94 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 NTN3O00634 580 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 KCNK2O95069 426 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 ATP6V1G2O95670 118 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 UCHL1P09936 223 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF728P0DKX0 622 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 GTF2F2P13984 249 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 ADPRMQ3LIE5 342 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 RAB12Q6IQ22 244 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SULF2Q8IWU5 870 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 CNTN4Q8IWV2 1026 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 INO80EQ8NBZ0 244 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-206ENST00000428680 OR13C2Q8NGS9 318 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 OR13C9Q8NGT0 318 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 OR13G1Q8NGZ3 307 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 AMDHD2Q9Y303 409 aa6.56□□□□□ -1.36
CNOT4-206ENST00000428680 CDRT15L2A8MXV6 281 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 CPEP16870 476 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 ABCD3P28288 659 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 C21orf33P30042 268 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-206ENST00000428680 GSK3AP49840 483 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 CXCR4P61073 352 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 DUSP8Q13202 625 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 NTRK2Q16620 822 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 ARHGAP11BQ3KRB8 267 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 TP53I3Q53FA7 332 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.55□□□□□ -1.36
CNOT4-206ENST00000428680 SPATA46Q5T0L3 261 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 GPR157Q5UAW9 335 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 BHLHA9Q7RTU4 235 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 EGFL6Q8IUX8 553 aa6.55□□□□□ -1.36
CNOT4-206ENST00000428680 COQ10BQ9H8M1 238 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms