RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ERVFC1P60507 584 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 IL10RAQ13651 578 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 IHHQ14623 411 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 IQCJQ1A5X6 159 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 LMNTD1Q8N9Z9 388 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
PTPN13-203ENST00000427191 IVDP26440 423 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 LIPHQ8WWY8 451 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 NDRG3Q9UGV2 375 aa13.32□□□□□ -0.28
PTPN13-203ENST00000427191 CTDSP2O14595 271 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 RPL11P62913 178 aaKnown RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 DHODHQ02127 395 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR51B6Q9H340 312 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF629Q9UEG4 869 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ABCD4O14678 606 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 CSO75390 466 aaKnown RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ORM1P02763 201 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 AMTP48728 403 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 C18orf21Q32NC0 220 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 SYT9Q86SS6 491 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ULBP3Q9BZM4 244 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 V9GYS6 101 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR8G3PP0DMU2 310 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ADRA1AP35348 466 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 IER5LQ5T953 404 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 NMES1Q9C002 83 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 TTC3P53804 2025 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 RICTORQ6R327 1708 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 YY2O15391 372 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ALX3O95076 343 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 PMP2P02689 132 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 FCER1GP30273 86 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 APOBEC1P41238 236 aaKnown RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR8G2PQ6IF36 304 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR52I1Q8NGK6 324 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 CABLES2Q9BTV7 478 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 KCND3Q9UK17 655 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 EXOSC7Q15024 291 aaKnown RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 CDH26Q8IXH8 852 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR4F5Q8NH21 305 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF480Q8WV37 535 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 OR4F4Q96R69 305 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 C11orf54Q9H0W9 315 aaPredicted RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 FRS3O43559 492 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 ADAM11O75078 769 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
PTPN13-203ENST00000427191 FOXK2Q01167 660 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 GTDC1Q4AE62 458 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 DGAT2L6Q6ZPD8 337 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 LYRM4Q9HD34 91 aa13.31□□□□□ -0.28
PTPN13-203ENST00000427191 EIF4E2O60573 245 aaKnown RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 ACSM4P0C7M7 580 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 K7ERQ8 282 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 XRCC3O43542 346 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 MRPL19P49406 292 aaKnown RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 ADGRF3Q8IZF5 1079 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 CCDC74BQ96LY2 380 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 PRRC2BQ5JSZ5 2229 aaKnown RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 SLC35E2P0CK97 266 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 EGR3Q06889 387 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF628Q5EBL2 1059 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 BADQ92934 168 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 SH2D1BO14796 132 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
PTPN13-203ENST00000427191 HCRTO43612 131 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 BIDP55957 195 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 KDM4DQ6B0I6 523 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 ATOH8Q96SQ7 321 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 FZD9O00144 591 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 NCR1O76036 304 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 SOD1P00441 154 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 ARR3P36575 388 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 THNSL2Q86YJ6 484 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 LYSMD2Q8IV50 215 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 S1PR3Q99500 378 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 PDCD1LG2Q9BQ51 273 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 PISDQ9UG56 409 aa13.3□□□□□ -0.28
PTPN13-203ENST00000427191 HNRNPA3P51991 378 aaKnown RBP13.29□□□□□ -0.28
PTPN13-203ENST00000427191 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
PTPN13-203ENST00000427191 SLC35D2Q76EJ3 337 aa13.29□□□□□ -0.28
PTPN13-203ENST00000427191 PCED1AQ9H1Q7 454 aa13.29□□□□□ -0.28
PTPN13-203ENST00000427191 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms