RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SLC18B1Q6NT16 456 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 C11orf87Q6NUJ2 197 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 BIVMQ86UB2 503 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OOSP2Q86WS3 158 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ZSCAN1Q8NBB4 408 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR6N2Q8NGY6 317 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 CCL4L1Q8NHW4 92 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 DUSP19Q8WTR2 217 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TSACCQ96A04 125 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 FOXRED1Q96CU9 486 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ARSGQ96EG1 525 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 MOGAT1Q96PD6 335 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 CHST6Q9GZX3 395 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 SRA1Q9HD15 236 aaKnown RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 DZANK1Q9NVP4 752 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 HRASLS2Q9NWW9 162 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 CKLFQ9UBR5 152 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PURGQ9UJV8 347 aaKnown RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PRELID3BQ9Y3B1 194 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR10H1Q9Y4A9 318 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 LRP4O75096 1905 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 HEATR5AQ86XA9 2040 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 SCN2AQ99250 2005 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 FAM171A2A8MVW0 826 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 C10orf142B7Z368 130 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TGFBR3LH3BV60 316 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 DCTN6O00399 190 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 MT-ATP6P00846 226 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 IGHMP01871 453 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 CD2P06729 351 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PROS1P07225 676 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ICAM2P13598 275 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PVRP15151 417 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 HNRNPA2B1P22626 353 aaKnown RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TACR3P29371 465 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 RORAP35398 523 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ARHGAP40Q5TG30 622 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TMEM225Q6GV28 225 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 KCTD18Q6PI47 426 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 NDUFAF7Q7L592 441 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 DPY19L4Q7Z388 723 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 STEAP2Q8NFT2 490 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR1J4Q8NGS1 313 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR9A4Q8NGU2 314 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR10K1Q8NGX5 313 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR10AC1Q8NH08 325 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 TSSK2Q96PF2 358 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PRRT1Q99946 306 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GPR174Q9BXC1 333 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ELOVL3Q9HB03 270 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-204ENST00000424143 COMMD9Q9P000 198 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 DTX4Q9Y2E6 619 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 A0A087WV48 116 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 POM121CA8CG34 1229 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 DISC1C4P0D8 188 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 H0YC42 278 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 EIF1AYO14602 144 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF264O43296 627 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 MTRF1O75570 445 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 SCGNO76038 276 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 NSA2O95478 260 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 BGLAPP02818 100 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ISG15P05161 165 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TBPP20226 339 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 HTR2CP28335 458 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 PPICP45877 212 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 EIF1AXP47813 144 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 STARP49675 285 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 GSK3AP49840 483 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TMEM196Q5HYL7 178 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 PDSS1Q5T2R2 415 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ATPAF1Q5TC12 328 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ADGRE4PQ86SQ3 457 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 CATSPERDQ86XM0 798 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TSEN15Q8WW01 171 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 MARC2Q969Z3 335 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF285Q96NJ3 590 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 NPAS1Q99742 590 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ATG5Q9H1Y0 275 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 MRTO4Q9UKD2 239 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF346Q9UL40 294 aaKnown RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 B9D1Q9UPM9 204 aa13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TP53BP1Q12888 1972 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-204ENST00000424143 TRAV36DV7A0A075B6V5 113 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 TVP23AA6NH52 213 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 FGF16O43320 207 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 SIGLEC6O43699 453 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 CYB5AP00167 134 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms