RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 RNF128Q8TEB7 428 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 RAB40AQ8WXH6 277 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 KISS1RQ969F8 398 aaPredicted RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 FAIMQ9NVQ4 179 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 GLTPQ9NZD2 209 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 LOC101059948A0A1B0GTJ6 334 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 SLC35F4A4IF30 521 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 J3QRE1 110 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 UPK1BO75841 260 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PPIAP62937 165 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 FABP5Q01469 135 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PLP2Q04941 152 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 CAMK2DQ13557 499 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 STK11Q15831 433 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PYHIN1Q6K0P9 492 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 YRDCQ86U90 279 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 TIGD4Q8IY51 512 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ZNF100Q8IYN0 542 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 NKAIN3Q8N8D7 197 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PNLDC1Q8NA58 520 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 SLC22A4Q9H015 551 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ENKD1Q9H0I2 346 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 AKIRIN1Q9H9L7 192 aaPredicted RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 V9GY05 133 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PCDH15Q96QU1 1955 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 SP1P08047 785 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 RPS19P39019 145 aaKnown RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 TPTEP56180 551 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ZNF766Q5HY98 468 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 TMEM53Q6P2H8 277 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 FDX2Q6P4F2 183 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 UNQ6126/PRO20091Q6UXV3 157 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 Q6ZNX1 250 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 UBQLNLQ8IYU4 475 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 FAM109AQ8N4B1 249 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 PELI1Q96FA3 418 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 ARL5BQ96KC2 179 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 GNRHR2Q96P88 292 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 HCAR1Q9BXC0 346 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
USP54-203ENST00000418501 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 AKIP1Q9NQ31 210 aa7.52□□□□□ -1.21
USP54-203ENST00000418501 TMEM269A0A1B0GVZ9 245 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 CALCBP10092 127 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 CLUP10909 449 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 HOXC12P31275 282 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ETV6P41212 452 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 PTGDSP41222 190 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 SOX8P57073 446 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ROM1Q03395 351 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ZNF57Q68EA5 555 aaPredicted RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 DESI1Q6ICB0 168 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 B3GLCTQ6Y288 498 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 FCRLAQ7L513 359 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 SHISA5Q8N114 240 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 OR9K2Q8NGE7 335 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 OR13C3Q8NGS6 347 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 SARAFQ96BY9 339 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 KCNK17Q96T54 332 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 RBM24Q9BX46 236 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 SPRY4Q9C004 299 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ACOXLQ9NUZ1 547 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ZNF391Q9UJN7 358 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 NOSIPQ9Y314 301 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 METTL21EPA6NDL7 271 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 TRABD2BA6NFA1 517 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 DHHO43323 396 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 QDPRP09417 244 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 SLC2A2P11168 524 aaPredicted RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 MST1P26927 711 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 CD96P40200 585 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 FAM83FQ8NEG4 500 aaPredicted RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 PGAM5Q96HS1 289 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 C7orf50Q9BRJ6 194 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 OR10A2Q9H208 303 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 RNF121Q9H920 327 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ISG20L2Q9H9L3 353 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 ZDBF2Q9HCK1 2354 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 G3V3Y1 287 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 ECDO95905 644 aaPredicted RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 TNFSF8P32971 234 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 TGFBR3Q03167 851 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 MRPL49Q13405 166 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 ARL6IP1Q15041 203 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 PGAP1Q75T13 922 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 TMPRSS7Q7RTY8 843 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 DCXRQ7Z4W1 244 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 OR2G2Q8NGZ5 317 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 POC1BQ8TC44 478 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 GP6Q9HCN6 339 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 PAIP2BQ9ULR5 123 aaKnown RBP7.51□□□□□ -1.21
USP54-203ENST00000418501 FOXJ3Q9UPW0 622 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 EML5Q05BV3 1969 aa7.51□□□□□ -1.21
USP54-203ENST00000418501 RP1P56715 2156 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms