RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 FUNDC1Q8IVP5 155 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZNF101Q8IZC7 436 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ICA1LQ8NDH6 482 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 HIPK4Q8NE63 616 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.33
DDX56-202ENST00000415758 POM121L2Q96KW2 1035 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 SLITRK2Q9H156 845 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 UNKLQ9H9P5 680 aaKnown RBP13.02□□□□□ -0.33
DDX56-202ENST00000415758 SIAEQ9HAT2 523 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 CYSLTR2Q9NS75 346 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZNF69Q9UC07 566 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZNF229Q9UJW7 825 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZDHHC8Q9ULC8 765 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 ICMTO60725 284 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 THY1P04216 161 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 RNASE1P07998 156 aaKnown RBP13.01□□□□□ -0.33
DDX56-202ENST00000415758 CD55P08174 381 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 STOMP27105 288 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 GCH1P30793 250 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 WNT5AP41221 380 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 SLC18A1P54219 525 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
DDX56-202ENST00000415758 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
DDX56-202ENST00000415758 GLO1Q04760 184 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 NPTX1Q15818 432 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 DUSP7Q16829 419 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 PABPC1L2AQ5JQF8 200 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 CEP85LQ5SZL2 805 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 THEM4Q5T1C6 240 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 C10orf128Q5T292 105 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 TTC33Q6PID6 262 aaPredicted RBP13.01□□□□□ -0.33
DDX56-202ENST00000415758 LRRC18Q8N456 261 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 ANKRD42Q8N9B4 389 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 KLF14Q8TD94 323 aaPredicted RBP13.01□□□□□ -0.33
DDX56-202ENST00000415758 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 ZNF347Q96SE7 839 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 DIRC2Q96SL1 478 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 ARHGDIGQ99819 225 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 C1QTNF5Q9BXJ0 243 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 CENPHQ9H3R5 247 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 MMP26Q9NRE1 261 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 UBAP1Q9NZ09 502 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 NPTNQ9Y639 398 aa13.01□□□□□ -0.33
DDX56-202ENST00000415758 LOC100509620A0A075B734 347 aa13□□□□□ -0.33
DDX56-202ENST00000415758 TMEM120BA0PK00 339 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ISPDA4D126 451 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ZSCAN5BA6NJL1 495 aa13□□□□□ -0.33
DDX56-202ENST00000415758 TRAPPC2LH3BP13 241 aa13□□□□□ -0.33
DDX56-202ENST00000415758 H3BSA7 217 aa13□□□□□ -0.33
DDX56-202ENST00000415758 M0R3H8 397 aa13□□□□□ -0.33
DDX56-202ENST00000415758 IGHV2-70P01814 119 aa13□□□□□ -0.33
DDX56-202ENST00000415758 IGHMP01871 453 aa13□□□□□ -0.33
DDX56-202ENST00000415758 HIST1H2ABP04908 130 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ZNF12P17014 697 aa13□□□□□ -0.33
DDX56-202ENST00000415758 AQP1P29972 269 aa13□□□□□ -0.33
DDX56-202ENST00000415758 MPV17P39210 176 aa13□□□□□ -0.33
DDX56-202ENST00000415758 SLC6A9P48067 706 aa13□□□□□ -0.33
DDX56-202ENST00000415758 CLRN1P58418 232 aa13□□□□□ -0.33
DDX56-202ENST00000415758 HSF2Q03933 536 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ZNF154Q13106 437 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
DDX56-202ENST00000415758 PAGE3Q5JUK9 113 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ENTPD8Q5MY95 495 aa13□□□□□ -0.33
DDX56-202ENST00000415758 EPGNQ6UW88 154 aa13□□□□□ -0.33
DDX56-202ENST00000415758 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
DDX56-202ENST00000415758 CROCCP2Q86T23 111 aa13□□□□□ -0.33
DDX56-202ENST00000415758 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
DDX56-202ENST00000415758 SMYD1Q8NB12 490 aa13□□□□□ -0.33
DDX56-202ENST00000415758 NOXO1Q8NFA2 376 aa13□□□□□ -0.33
DDX56-202ENST00000415758 OR6T1Q8NGN1 323 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ADAMTS16Q8TE57 1224 aa13□□□□□ -0.33
DDX56-202ENST00000415758 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
DDX56-202ENST00000415758 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
DDX56-202ENST00000415758 SLC25A28Q96A46 364 aa13□□□□□ -0.33
DDX56-202ENST00000415758 ZNF48Q96MX3 618 aaPredicted RBP13□□□□□ -0.33
DDX56-202ENST00000415758 KCNN2Q9H2S1 579 aa13□□□□□ -0.33
DDX56-202ENST00000415758 EIF3KQ9UBQ5 218 aaKnown RBP13□□□□□ -0.33
DDX56-202ENST00000415758 AUP1Q9Y679 476 aa13□□□□□ -0.33
DDX56-202ENST00000415758 VWFP04275 2813 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
DDX56-202ENST00000415758 A8MXK9 166 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 EVPLLA8MZ36 301 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 ERLIN1O75477 346 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 ACADSP16219 412 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 CCNOP22674 350 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 BAMBIQ13145 260 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 TMEM155Q4W5P6 130 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 SLC25A40Q8TBP6 338 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 ASB10Q8WXI3 467 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 NABP1Q96AH0 204 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 SPDL1Q96EA4 605 aa12.99□□□□□ -0.33
DDX56-202ENST00000415758 DUX5Q96PT3 197 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms