RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NDUFB2O95178 105 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 CCL2P13500 99 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 RRM2P31350 389 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 EFNA4P52798 201 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 SMIM11AP58511 58 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 GALK2Q01415 458 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 THSD4Q6ZMP0 1018 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 FAM122BQ7Z309 247 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 DPPA2Q7Z7J5 298 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 ZDHHC21Q8IVQ6 265 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 ARHGAP24Q8N264 748 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 SVOPLQ8N434 492 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 FNDC8Q8TC99 324 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 RSRC1Q96IZ7 334 aaKnown RBP12.79□□□□□ -0.36
LIMS4-201ENST00000413601 SORCS2Q96PQ0 1159 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 GPA33Q99795 319 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 VRK1Q99986 396 aaPredicted RBP12.79□□□□□ -0.36
LIMS4-201ENST00000413601 RHNO1Q9BSD3 238 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
LIMS4-201ENST00000413601 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 SPEF1Q9Y4P9 236 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 FAM171A2A8MVW0 826 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 GPRIN2O60269 458 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
LIMS4-201ENST00000413601 HEXAP06865 529 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
LIMS4-201ENST00000413601 FXYD6P3P58550 94 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 MS4A2Q01362 244 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 TRIM25Q14258 630 aaKnown RBP12.78□□□□□ -0.36
LIMS4-201ENST00000413601 MSMPQ1L6U9 139 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 MESTQ5EB52 335 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 CLEC2AQ6UVW9 174 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
LIMS4-201ENST00000413601 SLC30A7Q8NEW0 376 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 BCAS4Q8TDM0 211 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 RASD2Q96D21 266 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF570Q96NI8 536 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 DOK1Q99704 481 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 NDEL1Q9GZM8 345 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 KCNN2Q9H2S1 579 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 CCNB1IP1Q9NPC3 277 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 TAS2R1Q9NYW7 299 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
LIMS4-201ENST00000413601 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 TEX13CA0A0J9YWL9 993 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 IQCMA0A1B0GVH7 501 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 A0A1W2PPL8 197 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 TCRBV5S2A0A599 114 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 XKRYO14609 159 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 MGRN1O60291 552 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 ZNF32P17041 273 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 APEX1P27695 318 aaKnown RBP12.77□□□□□ -0.37
LIMS4-201ENST00000413601 LAP3P28838 519 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 GLRXP35754 106 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 HSF2Q03933 536 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 PLP2Q04941 152 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 PABPC1L2AQ5JQF8 200 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 FAM27BQ5VT28 67 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 ZER1Q7Z7L7 766 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
LIMS4-201ENST00000413601 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
LIMS4-201ENST00000413601 OR10H5Q8NGA6 315 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 CLPTM1LQ96KA5 538 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 MUC13Q9H3R2 512 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 CDH20Q9HBT6 801 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 NRIP3Q9NQ35 241 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 MTORP42345 2549 aa12.77□□□□□ -0.37
LIMS4-201ENST00000413601 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 SOCS2O14508 198 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 OR10H3O60404 316 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 PTHP01270 115 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 SCG5P05408 212 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 FAM157BP0CG42 384 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 SDHAP31040 664 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
LIMS4-201ENST00000413601 PPOXP50336 477 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 DSCR9P59020 149 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
LIMS4-201ENST00000413601 TBC1D28Q2M2D7 210 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 MTX3Q5HYI7 312 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 SMARCD3Q6STE5 483 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 FOXL2NBQ6ZUU3 175 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 TRPM8Q7Z2W7 1104 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 AKR7LQ8NHP1 331 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 FAM168AQ92567 244 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
LIMS4-201ENST00000413601 FOXN4Q96NZ1 517 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 GPX7Q96SL4 187 aaPredicted RBP12.76□□□□□ -0.37
LIMS4-201ENST00000413601 SYT3Q9BQG1 590 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
LIMS4-201ENST00000413601 C1orf21Q9H246 121 aa12.76□□□□□ -0.37
LIMS4-201ENST00000413601 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms