RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 USH1CQ9Y6N9 552 aa5.06□□□□□ -1.6
HMGN1P20-201ENST00000411849 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 TRAV36DV7A0A075B6V5 113 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 IGHV3OR16-10A0A075B7F0 116 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 A0A087WUJ7 227 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 TRAV40A0A0B4J280 105 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 C5orf63A6NC05 138 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 TMEM247A6NEH6 219 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CCDC154A6NI56 674 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MS4A18H0YCH9 400 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 UBDO15205 165 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 ATP8B1O43520 1251 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MFN2O95140 757 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 TSPAN15O95858 294 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 HPRP00739 348 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PATE4P0C8F1 98 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 IGHV4-38-2P0DP08 117 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CCL2P13500 99 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PRG2P13727 222 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CPT2P23786 658 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CD80P33681 288 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 S100A3P33764 101 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 APLNRP35414 380 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MRPL19P49406 292 aaKnown RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 IDH3AP50213 366 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CRISP3P54108 245 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 NME5P56597 212 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 ERVS71-1P61550 626 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 GLO1Q04760 184 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PAX8Q06710 450 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PUDPQ08623 228 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 LRRC74AQ0VAA2 488 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 BEAN1Q3B7T3 259 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MS4A18Q3C1V0 323 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 ZNF718Q3SXZ3 478 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 NXNQ6DKJ4 435 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 C6orf89Q6UWU4 347 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 ZNF620Q6ZNG0 422 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 Q6ZPA2 131 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PXKQ7Z7A4 578 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 SERPINA11Q86U17 422 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 VRK2Q86Y07 508 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 C1orf174Q8IYL3 243 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MUC20Q8N307 709 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MIER2Q8N344 545 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 OR1J1Q8NGS3 322 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 OR6S1Q8NH40 331 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 FAM110DQ8TAY7 271 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 DYDC1Q8WWB3 177 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 DYRK2Q92630 601 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 GTF3AQ92664 365 aaKnown RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 TAAR8Q969N4 342 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 THOC1Q96FV9 657 aaKnown RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 FAM71F1Q96KD3 344 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CCDC115Q96NT0 180 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 PANX1Q96RD7 426 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 EPYCQ99645 322 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 EBF4Q9BQW3 602 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 CCDC28BQ9BUN5 200 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 RNF121Q9H920 327 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 MARCH7Q9H992 704 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 NPHS2Q9NP85 383 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 A4GALTQ9NPC4 353 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 SDR39U1Q9NRG7 319 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 ZIM2Q9NZV7 527 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 P2RX2Q9UBL9 471 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 EGFL7Q9UHF1 273 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 BTNL2Q9UIR0 455 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 IFT52Q9Y366 437 aa5.05□□□□□ -1.6
HMGN1P20-201ENST00000411849 A0A0G2JPF8 293 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 MDFIC2A0A1B0GVS7 189 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 ZSCAN5BA6NJL1 495 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 HNRNPCL2B2RXH8 293 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 HNRNPCL3B7ZW38 293 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 E9PBE3 544 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 H3BSA7 217 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 MGRN1O60291 552 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 HNRNPCL1O60812 293 aaKnown RBP5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 EDF1O60869 148 aaKnown RBP5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 SLC22A3O75751 556 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 CLPXO76031 633 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 KRT75O95678 551 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 C1QCP02747 245 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 BCHEP06276 602 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 CD55P08174 381 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 CSF1P09603 554 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 HNRNPCL4P0DMR1 293 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 HLA-DOBP13765 273 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 IDO1P14902 403 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 TNFSF4P23510 183 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 AHCYP23526 432 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 MDH2P40926 338 aaKnown RBP5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 MMP15P51511 669 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 BIDP55957 195 aa5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 SEC61A1P61619 476 aaKnown RBP5.04□□□□□ -1.6
HMGN1P20-201ENST00000411849 BTG1P62324 171 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms