RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	CTBP2	P56545	445 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SRSF2	Q01130	221 aa	Known RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	FAP	Q12884	760 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ZNF155	Q12901	538 aa	Predicted RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	KRTAP24-1	Q3LI83	254 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	CHRFAM7A	Q494W8	412 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	GLYR1	Q49A26	553 aa	Predicted RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	BEND4	Q6ZU67	534 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ZNF619	Q8N2I2	560 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	CDRT4	Q8N9R6	151 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	OR10D3	Q8NH80	312 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SMAP2	Q8WU79	429 aa	Predicted RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SLC9A6	Q92581	669 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	FBXW5	Q969U6	566 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	FAM46A	Q96IP4	442 aa	Known RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	POLE3	Q9NRF9	147 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	IL20	Q9NYY1	176 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	VDAC3	Q9Y277	283 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	GPR52	Q9Y2T5	361 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	CDH10	Q9Y6N8	788 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	YLPM1	P49750	1951 aa	Known RBP	11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SVEP1	Q4LDE5	3571 aa		11.22	□□□□□ -0.61
CHRNA1-205	ENST00000409542		A0A096LNT2	108 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542		A0A0J9YW62	118 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	GXYLT2	A0PJZ3	443 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542		A8MV72	311 aa	Predicted RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ZNF670-ZNF695	F2Z2N8	137 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	LOC110117498-PIK3R3	F6TDL0	507 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	FMO6P	O60774	539 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	STX11	O75558	287 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	IL33	O95760	270 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PLG	P00747	810 aa	Predicted RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	F12	P00748	615 aa	Predicted RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	IGKV1D-16	P01601	117 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	THY1	P04216	161 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	GUSB	P08236	651 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	FCGR2A	P12318	317 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PSMB1	P20618	241 aa	Known RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PTN	P21246	168 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	MAP3K8	P41279	467 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	WNT4	P56705	351 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SEZ6L2	Q6UXD5	910 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ZNF620	Q6ZNG0	422 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	CCDC190	Q86UF4	302 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	LYSMD2	Q8IV50	215 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	NKAIN4	Q8IVV8	208 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PIK3R3	Q92569	461 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	HOXB13	Q92826	284 aa	Predicted RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	RFK	Q969G6	155 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ITPKC	Q96DU7	683 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	RNFT2	Q96EX2	444 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PRR14	Q9BWN1	585 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	ASPN	Q9BXN1	380 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	PTGES2	Q9H7Z7	377 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SDHAF3	Q9NRP4	125 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	CHCHD3	Q9NX63	227 aa	Known RBP	11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	SSR3	Q9UNL2	185 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	RNF115	Q9Y4L5	304 aa		11.21	□□□□□ -0.61
CHRNA1-205	ENST00000409542	IGHV4-30-2	A0A087WSY4	118 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	IGLV3-32	A0A0A0MS00	114 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	TRAPPC13	A5PLN9	417 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	DPRX	A6NFQ7	191 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	TNFSF11	O14788	317 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	HMGN1	P05114	100 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	AGTR1	P30556	359 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	MTNR1A	P48039	350 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	RFX3	P48380	749 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	ETV1	P50549	477 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	COPZ1	P61923	177 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	TPBG	Q13641	420 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	TAB1	Q15750	504 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	ETFDH	Q16134	617 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	ZNF672	Q499Z4	452 aa	Predicted RBP	11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	DCST2	Q5T1A1	773 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	AADACL4	Q5VUY2	407 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	FIGNL1	Q6PIW4	674 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	NUFIP2	Q7Z417	695 aa	Known RBP	11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	PARP16	Q8N5Y8	322 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	ANKK1	Q8NFD2	765 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	OR4Q3	Q8NH05	313 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	ROBO4	Q8WZ75	1007 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	NEURL2	Q9BR09	285 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	JAM3	Q9BX67	310 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	NUAK2	Q9H093	628 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	OR10A4	Q9H209	315 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	FBXO34	Q9NWN3	711 aa		11.2	□□□□□ -0.62
CHRNA1-205	ENST00000409542	SURF4	O15260	269 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	RAMP1	O60894	148 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	UTS2	O95399	124 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	CD3E	P07766	207 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	SHC1	P29353	583 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	PSPH	P78330	225 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	KRR1	Q13601	381 aa	Known RBP	11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	PAQR6	Q6TCH4	344 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	SNX29P2	Q8IUI4	249 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	NRM	Q8IXM6	262 aa		11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	RNF113B	Q8IZP6	322 aa	Known RBP	11.19	□□□□□ -0.62
CHRNA1-205	ENST00000409542	GABRG1	Q8N1C3	465 aa		11.19	□□□□□ -0.62

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