RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 DOK4Q8TEW6 326 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 GAL3ST3Q96A11 431 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 RBM18Q96H35 190 aaKnown RBP14□□□□□ -0.17
LIMS2-205ENST00000409455 COMMD4Q9H0A8 199 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 FAM171A2A8MVW0 826 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 LINC00587B1AMM8 73 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 GNB5O14775 395 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 SGCEO43556 437 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF432O94892 652 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 AK1P00568 194 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 NFATC4Q14934 902 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 ZFP82Q8N141 532 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 FRMD1Q8N878 549 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 WNT2BQ93097 391 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 OR2M4Q96R27 311 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 STACQ99469 402 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 ALG12Q9BV10 488 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 TRIM2Q9C040 744 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 MKKSQ9NPJ1 570 aaPredicted RBP14□□□□□ -0.17
LIMS2-205ENST00000409455 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 CYP8B1Q9UNU6 501 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 A0A0C4DFX4 3053 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM72A0PK05 275 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 BRINP1O60477 761 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 ACTL6AO96019 429 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 HLA-AP01891 365 aaKnown RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 AMY2AP04746 511 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 FABP1P07148 127 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 SMIM6P0DI80 62 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CPMP14384 443 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CSRP1P21291 193 aaKnown RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CMPK1P30085 196 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 TLX1P31314 330 aaPredicted RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 PDZK1IP1Q13113 114 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF813Q6ZN06 617 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 SYT13Q7L8C5 426 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF676Q8N7Q3 588 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 OR52E1Q8NGJ3 308 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CCL4L1Q8NHW4 92 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 RXFP4Q8TDU9 374 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 PAQR8Q8TEZ7 354 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 RASD2Q96D21 266 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CNTNAP3BQ96NU0 1288 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CRB3Q9BUF7 120 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 NMNAT2Q9BZQ4 307 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 TLNRD1Q9H1K6 362 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 FBXO4Q9UKT5 387 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 SCN3AQ9NY46 2000 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 NUDT19A8MXV4 375 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 UPK3AO75631 287 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 S100A9P06702 114 aaKnown RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 GPR143P51810 404 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 PRKXP51817 358 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 CAPZA1P52907 286 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 ATP1B3P54709 279 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 INPP5JQ15735 1006 aaPredicted RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 PRAMEF17Q5VTA0 474 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 UNQ6126/PRO20091Q6UXV3 157 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 SKA3Q8IX90 412 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 GPX8Q8TED1 209 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 PMM1Q92871 262 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 SEC22AQ96IW7 307 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 ADAD1Q96M93 576 aaKnown RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 TBC1D29Q9UFV1 150 aa13.99□□□□□ -0.17
LIMS2-205ENST00000409455 MRM2Q9UI43 246 aaKnown RBP13.99□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM200CA6NKL6 621 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 CCSO14618 274 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 EML2O95834 649 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 IGHV4-34P06331 123 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 HEXAP06865 529 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF806P0C7X5 589 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ID2Q02363 134 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ATPAF1Q5TC12 328 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-205ENST00000409455 NDUFAF7Q7L592 441 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 SLC16A9Q7RTY1 509 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM229BQ8NBD8 167 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 NANPQ8TBE9 248 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 GPR148Q8TDV2 347 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 TCEAL3Q969E4 200 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ZBTB8AQ96BR9 441 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 SEC11CQ9BY50 192 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ATG5Q9H1Y0 275 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 TREM1Q9NP99 234 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 PLEKHA6Q9Y2H5 1048 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 SNRNP200O75643 2136 aaKnown RBP13.98□□□□□ -0.17
LIMS2-205ENST00000409455 GON4LQ3T8J9 2241 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 TRBV5-7A0A0A0MS05 114 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 OR2W5A6NFC9 320 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 OR6C76A6NM76 312 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 M0QYG6 137 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 SULT2B1O00204 365 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ARPC3O15145 178 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 FGF16O43320 207 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 RDH16O75452 317 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 APBB3O95704 486 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 F12P00748 615 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ACAA1P09110 424 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-205ENST00000409455 FOSL2P15408 326 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms