RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FBXL2Q9UKC9 423 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 PRRG2O14669 202 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 DFFBO76075 338 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SNRPBP14678 240 aaKnown RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 GDNFP39905 211 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TGM4P49221 684 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF91Q05481 1191 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SUMF1Q8NBK3 374 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 OR13C9Q8NGT0 318 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 C3orf30Q96M34 536 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 CDCP1Q9H5V8 836 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SGCEO43556 437 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 GIPRP48546 466 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 OR1D5P58170 312 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 CRMP1Q14194 572 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 PIWIL3Q7Z3Z3 882 aaKnown RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 LFNGQ8NES3 379 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TMEM200CA6NKL6 621 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 HCRTR1O43613 425 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 UBL3O95164 117 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 DHRS4L1P0CG22 281 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 DUSP1P28562 367 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF705AQ6ZN79 300 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TMEM104Q8NE00 496 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 BPIFCQ8NFQ6 507 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SEC22CQ9BRL7 303 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 MAGEB4O15481 346 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 CSF3P09919 207 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 M6PRP20645 277 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ADIRFQ15847 76 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 FAM58AQ8N1B3 248 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 PLK3Q9H4B4 646 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 PSMB1P20618 241 aaKnown RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ILKQ13418 452 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ALKAL2Q6UX46 152 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 DCXRQ7Z4W1 244 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 NMNAT3Q96T66 252 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 OSGIN2Q9Y236 505 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 MBLAC1A4D2B0 266 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SH2D1BO14796 132 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 AGFG1P52594 562 aaKnown RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 CLDN12P56749 244 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 SEC22AQ96IW7 307 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 INSM2Q96T92 566 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 GMLQ99445 158 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 GAREM1Q9H706 876 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 ANKRD10Q9NXR5 420 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 P2RY10O00398 339 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 UBE2G1P62253 170 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 CD14P08571 375 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 MARCH8Q5T0T0 291 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 OR10K1Q8NGX5 313 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 BARX1Q9HBU1 254 aaPredicted RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 CSNK1G1Q9HCP0 422 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 EXO1Q9UQ84 846 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ABCD4O14678 606 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 NME2P22392 152 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 MTNR1BP49286 362 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 PNPLA1Q8N8W4 532 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 FAM3DQ96BQ1 224 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 THOC3Q96J01 351 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF416Q9BWM5 594 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 P2RY12Q9H244 342 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 DNMT3BQ9UBC3 853 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 PMS2P2O95744 297 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 BCL7AQ4VC05 210 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 H1FNTQ75WM6 255 aaPredicted RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 SEMA6DQ8NFY4 1073 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 OR4Q3Q8NH05 313 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 PSD2Q9BQI7 771 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 RTL8AQ9BWD3 113 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 G3V3Y1 287 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF749O43361 778 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ALDOCP09972 364 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 NLRP8Q86W28 1048 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 PHYHIPQ92561 330 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ATOH8Q96SQ7 321 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF331Q9NQX6 463 aaPredicted RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 KLK4Q9Y5K2 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms