RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 AGAP7PQ5VUJ5 663 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 TTC19Q6DKK2 380 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 HIST2H2AA3Q6FI13 130 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 MBOAT1Q6ZNC8 495 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ASRGL1Q7L266 308 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 GOLGA7Q7Z5G4 137 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 THOC6Q86W42 341 aaKnown RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 LRRC34Q8IZ02 419 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC25A45Q8N413 288 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ARL14Q8N4G2 192 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 TEX9Q8N6V9 391 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCNYL1Q8N7R7 359 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SUMF1Q8NBK3 374 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4C6Q8NH72 309 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 AGAP11Q8TF27 550 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC13A3Q8WWT9 602 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NAT6Q93015 286 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ANKRD9Q96BM1 317 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NTNG2Q96CW9 530 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCT8L2Q96SF2 557 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 C20orf27Q9GZN8 174 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 RAB33BQ9H082 229 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 Q9HAA7 133 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ADGRL4Q9HBW9 690 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC40A1Q9NP59 571 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLCO1B3Q9NPD5 702 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 FGFR1OP2Q9NVK5 253 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF225Q9UK10 706 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ENTPD4Q9Y227 616 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC22A14Q9Y267 594 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CSAG2Q9Y5P2 127 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 COL27A1Q8IZC6 1860 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 PTPRZ1P23471 2315 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 TRPC5OSA6NMA1 111 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 H0YIV9 168 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 UBFD1O14562 309 aaKnown RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR7A17O14581 309 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 AZIN1O14977 448 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 HDAC3O15379 428 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZW10O43264 779 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 SDC3O75056 442 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 LYPLA1O75608 230 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 KRT6AP02538 564 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 KRT6BP04259 564 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ALPPP05187 535 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 PROS1P07225 676 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 MELTFP08582 738 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 C1GALT1C1LP0DN25 315 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 TROVE2P10155 538 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 BCL3P20749 454 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 KRT6CP48668 564 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 DUSP3P51452 185 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ATXN3P54252 364 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 DSCR10P59022 87 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 TBPL1P62380 186 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 CBX1P83916 185 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 IRF8Q02556 426 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC5A12Q1EHB4 618 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 HKDC1Q2TB90 917 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 DEFB133Q30KQ1 61 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 C18orf21Q32NC0 220 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 PAGE2BQ5JRK9 111 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 LIPKQ5VXJ0 399 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 RHBDD2Q6NTF9 364 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 OOSP2Q86WS3 158 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 LINC01555Q8NAE3 123 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4F6Q8NGB9 312 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR2A1Q8NGT9 310 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ITLN1Q8WWA0 313 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC5A11Q8WWX8 675 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 LCN9Q8WX39 176 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 PATE1Q8WXA2 126 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 HIST1H2ACQ93077 130 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 TOMM40LQ969M1 308 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 UBE2E3Q969T4 207 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 TMEM45BQ96B21 275 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4K3Q96R72 315 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 COQ7Q99807 217 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 EFCAB11Q9BUY7 163 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ST6GALNAC5Q9BVH7 336 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 NLNQ9BYT8 704 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 CHRNA10Q9GZZ6 450 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ATG10Q9H0Y0 220 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 SRMSQ9H3Y6 488 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ACTR8Q9H981 624 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ANKMY1Q9P2S6 941 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 KCNN3Q9UGI6 736 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 ATG4BQ9Y4P1 393 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 DNAJC15Q9Y5T4 150 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 KLF2Q9Y5W3 355 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 USH1CQ9Y6N9 552 aa3.88□□□□□ -1.79
HMGB3P19-201ENST00000403971 PTPRBP23467 1997 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 KCNE1BA0A087WTH5 132 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 KRT87PA6NCN2 255 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RNF212BA8MTL3 300 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 C2orf74A8MZ97 194 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 283.3 ms