RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 IFT27Q9BW83 186 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 C12orf49Q9H741 205 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 ZNF224Q9NZL3 707 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 NDRG4Q9ULP0 352 aaKnown RBP6.58□□□□□ -1.36
USP16-204ENST00000399976 CLEC4AQ9UMR7 237 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 OAZ3Q9UMX2 235 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 B9D1Q9UPM9 204 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 IER3IP1Q9Y5U9 82 aa6.58□□□□□ -1.36
USP16-204ENST00000399976 C11orf98E9PRG8 122 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 C19orf84I3L1E1 186 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 PHYHO14832 338 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 F13BP05160 661 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 ZNF14P17017 642 aaPredicted RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 HSPA13P48723 471 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 NUDT6P53370 316 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 LSM11P83369 360 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP16-204ENST00000399976 ARF1P84077 181 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 LAPTM4AQ15012 233 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 TMEM108Q6UXF1 575 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SLC37A3Q8NCC5 494 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SLC26A10Q8NG04 563 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 PYDC1Q8WXC3 89 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 Q96M85 177 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 WFIKKN1Q96NZ8 548 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 PLA2G12AQ9BZM1 189 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 VCXQ9H320 206 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 TOR3AQ9H497 397 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 RNPEPL1Q9HAU8 725 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 RASSF1Q9NS23 344 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 DDX28Q9NUL7 540 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 MRPS18AQ9NVS2 196 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 CGGBP1Q9UFW8 167 aaPredicted RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 LRRC42Q9Y546 428 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 A6NHS1 94 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CTAG2O75638 210 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 GLCEO94923 617 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 PPP1R3DO95685 299 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 RGS6P49758 472 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 UBE2NP61088 152 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 ERVK-25P63136 954 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 MYBPC1Q00872 1141 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 HSF2Q03933 536 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 FAM27E3Q08E93 113 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CAMK2DQ13557 499 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 EFNB3Q15768 340 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 DEGS2Q6QHC5 323 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 LRRC75A-AS1Q8N1F1 130 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 OR8J1Q8NGP2 316 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 TMEM163Q8TC26 289 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 HDHD2Q9H0R4 259 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 WARS2Q9UGM6 360 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 TANC2Q9HCD6 1990 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 MYO7BQ6PIF6 2116 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SLC22A31A6NKX4 558 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CASKO14936 926 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SERPINA5P05154 406 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 HIST1H1CP16403 213 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 EDNRAP25101 427 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 GGT2P36268 569 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CDKN2AP42771 156 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 GUCA1AP43080 201 aaPredicted RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 CAPZA2P47755 286 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 RPS23P62266 143 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 IL1RL1Q01638 556 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SLC34A1Q06495 639 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 BLMHQ13867 455 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 PTGES3Q15185 160 aaKnown RBP6.57□□□□□ -1.36
USP16-204ENST00000399976 RAB35Q15286 201 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 TAB1Q15750 504 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SHFQ7M4L6 423 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 LUZP2Q86TE4 346 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 UBE2J2Q8N2K1 259 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 YIPF3Q9GZM5 350 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 OPA3Q9H6K4 179 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 EGLN3Q9H6Z9 239 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 NIPAL2Q9H841 368 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 SP140LQ9H930 580 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CRIM1Q9NZV1 1036 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 TIMM10BQ9Y5J6 103 aa6.57□□□□□ -1.36
USP16-204ENST00000399976 CIB4A0PJX0 185 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 IRGMA1A4Y4 181 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 OR6C6A6NF89 314 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 SNTNA6NMZ2 147 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 APOC1P02654 83 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
USP16-204ENST00000399976 OTX1P32242 354 aaPredicted RBP6.56□□□□□ -1.36
USP16-204ENST00000399976 CDC42P60953 191 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 RUNX1T1Q06455 604 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 ENDOGQ14249 297 aaKnown RBP6.56□□□□□ -1.36
USP16-204ENST00000399976 MELKQ14680 651 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 GINS1Q14691 196 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 GSG1Q2KHT4 349 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 TTC23Q5W5X9 447 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 ZNF813Q6ZN06 617 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 PTCHD4Q6ZW05 846 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 DTX2Q86UW9 622 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 WDFY1Q8IWB7 410 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
USP16-204ENST00000399976 CCDC54Q8NEL0 328 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms