RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 COL28A1Q2UY09 1125 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CBLN3Q6UW01 205 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 C3P1Q6ZMU1 363 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 UTS2BQ765I0 119 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLC35F2Q8IXU6 374 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GJC3Q8NFK1 279 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLC7A6Q92536 515 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SHPKQ9UHJ6 478 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 LAMP5Q9UJQ1 280 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CARD8Q9Y2G2 431 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 V9GYH0 126 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 KIAA1549Q9HCM3 1950 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF878C9JN71 531 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 MLLT10P55197 1068 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 MEF2DQ14814 521 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 LYPD6Q86Y78 171 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 SIRT6Q8N6T7 355 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 Q8NFD4 153 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR10H5Q8NGA6 315 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR4K17Q8NGC6 315 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PIGKQ92643 395 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TSLPQ969D9 159 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 NEURL2Q9BR09 285 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 AKAP6Q13023 2319 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 MCIDASD6RGH6 385 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TPOP07202 933 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CELA2BP08218 269 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 SLC2A2P11168 524 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ITPKBP27987 946 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 LAP3P28838 519 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR1D5P58170 312 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PHF19Q5T6S3 580 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 DRAM2Q6UX65 266 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 SLC35D2Q76EJ3 337 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PEG10Q86TG7 708 aaKnown RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 FAM160A2Q8N612 972 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR52E2Q8NGJ4 325 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CPT1CQ8TCG5 803 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 SCGB3A2Q96PL1 93 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ZFP57Q9NU63 452 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TAS2R5Q9NYW4 299 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 A0A0G2JK05 382 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 NPIPA2E9PIF3 369 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 FAM227AF5H4B4 570 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF85Q03923 595 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TLE3Q04726 772 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 KLHL12Q53G59 568 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CLEC12AQ5QGZ9 265 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OLFML2AQ68BL7 652 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF782Q6ZMW2 699 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 Q8N402 240 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 POC5Q8NA72 575 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR4F15Q8NGB8 312 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 OR6N1Q8NGY5 312 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CPNE4Q96A23 557 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CLIP3Q96DZ5 547 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PHOX2BQ99453 314 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TMPRSS13Q9BYE2 586 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 RNF121Q9H920 327 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 EDARQ9UNE0 448 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 R4GMQ9 66 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CTDSP2O14595 271 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TBX1O43435 398 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 XRCC3O43542 346 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ADAM11O75078 769 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 RGS11O94810 467 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TGM6O95932 706 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CH25HO95992 272 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 COX15Q7KZN9 410 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 DEFB123Q8N688 67 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CAPSLQ8WWF8 208 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 RFT1Q96AA3 541 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 SCMH1Q96GD3 660 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CST11Q9H112 138 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TCF7L1Q9HCS4 588 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 STARD5Q9NSY2 213 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CLEC2DQ9UHP7 191 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 DAPK2Q9UIK4 370 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 CHCHD2Q9Y6H1 151 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 S100A9P06702 114 aaKnown RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 RPS11P62280 158 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 HSF1Q00613 529 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 GK2Q14410 553 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PWWP2BQ6NUJ5 590 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ARL9Q6T311 187 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 LIN28AQ9H9Z2 209 aaKnown RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 UPB1Q9UBR1 384 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 KLF13Q9Y2Y9 288 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 NPTNQ9Y639 398 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 NAV3Q8IVL0 2385 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 NPIPA5E9PKD4 350 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 PRKRAO75569 313 aaKnown RBP5.27□□□□□ -1.57
PTPRD-206ENST00000397617 ACTL6AO96019 429 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 TFPIP10646 304 aa5.27□□□□□ -1.57
PTPRD-206ENST00000397617 AIMP2Q13155 320 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms