RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 IKZF5Q9H5V7 419 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 TAS2R5Q9NYW4 299 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 SPO11Q9Y5K1 396 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 IGLV3-22A0A075B6J6 115 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 DEGS1O15121 323 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 AREGP15514 252 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 APEX1P27695 318 aaKnown RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 SIRPAP78324 504 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 EDDM3AQ14507 147 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 ACKR1Q16570 336 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF528Q3MIS6 628 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 RNASEKQ6P5S7 137 aaKnown RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 A0A0A6YYJ9 748 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 H3BVH4 76 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 TAAR5O14804 337 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 GPRIN2O60269 458 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 OR2G6Q5TZ20 316 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 L3MBTL4Q8NA19 623 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 NTPCRQ9BSD7 190 aaKnown RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 PLEKHF2Q9H8W4 249 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 ZMAT3Q9HA38 289 aaKnown RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 MED17Q9NVC6 651 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 OR2F2O95006 317 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 SLC25A6P12236 298 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 OR2F1Q13607 317 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 Q499Y3 187 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 CD200R1Q8TD46 325 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 ACPTQ9BZG2 426 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 TMEM231Q9H6L2 316 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 ESRP2Q9H6T0 727 aaKnown RBP9.56□□□□□ -0.88
COL4A4-201ENST00000396625 WDR76Q9H967 626 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 MUTYHQ9UIF7 546 aa9.56□□□□□ -0.88
COL4A4-201ENST00000396625 H7C1C5 153 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 FGF18O76093 207 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 F2P00734 622 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 GTDC1Q4AE62 458 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF787Q6DD87 383 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 SLC12A9Q9BXP2 914 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 A0A0J9YY10 115 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 TMEM221A6NGB7 291 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 F13BP05160 661 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 MMP7P09237 267 aaPredicted RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 RBPJQ06330 500 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 EXOSC2Q13868 293 aaKnown RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF573Q86YE8 665 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 CISD2Q8N5K1 135 aaKnown RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 DTWD2Q8NBA8 298 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 SUOXP51687 545 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 THEM4Q5T1C6 240 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR52R1Q8NGF1 315 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 KLRG1Q96E93 195 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 SPHK2Q9NRA0 654 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 UBQLN4Q9NRR5 601 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR1A1Q9P1Q5 309 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 WTIPA6NIX2 430 aaPredicted RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OPN5Q6U736 354 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 GDPD3Q7L5L3 318 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 RETREG3Q86VR2 466 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 CLDN22Q8N7P3 220 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 MFSD9Q8NBP5 474 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR10G3Q8NGC4 313 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR51S1Q8NGJ8 323 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 HRASLS5Q96KN8 279 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ACOXLQ9NUZ1 547 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 GIPP09681 153 aaPredicted RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 NAT1P18440 290 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 GPR12P47775 334 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 NHLH1Q02575 133 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 NHLH2Q02577 135 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 PPP1R3BQ86XI6 285 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ZNF561Q8N587 486 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 PCED1AQ9H1Q7 454 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 C11orf49Q9H6J7 331 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 KLK4Q9Y5K2 254 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 A0A0G2JLL6 359 aaPredicted RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 CDC14CA4D256 554 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 PMS2P1A4D2B8 440 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 HS3ST1O14792 307 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 CD80P33681 288 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 PRRT2Q7Z6L0 340 aaPredicted RBP9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR2L13Q8N349 312 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 EID2Q8N6I1 236 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR5A2Q8NGI9 324 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 NDRG3Q9UGV2 375 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 TCRBV3S1A0A5B6 114 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 G3V2L1 256 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 ARPC3O15145 178 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 EVA1AQ9H8M9 152 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 FOCADQ5VW36 1801 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 HELTA6NFD8 242 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 FAM72CH0Y354 149 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 OR2T7P0C7T2 308 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 FAM72AQ5TYM5 149 aa9.55□□□□□ -0.88
COL4A4-201ENST00000396625 FAM72DQ6L9T8 149 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms