RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TMEM185BQ9H7F4 350 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 RPH3AQ9Y2J0 694 aaPredicted RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 V9GY05 133 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 TRBV5-7A0A0A0MS05 114 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 GPR171O14626 319 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 UBL3O95164 117 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 RAF1P04049 648 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 ZNF823P16415 610 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
CBX3-202ENST00000396386 KIR2DL3P43628 341 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 CCR9P51686 369 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 BIDP55957 195 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 PITPNAQ00169 270 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 C19orf57Q0VDD7 668 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 HES5Q5TA89 166 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 HACD4Q5VWC8 232 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 UEVLDQ8IX04 471 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 DTX3Q8N9I9 347 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 OR5M1Q8NGP8 315 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 ZPBPQ9BS86 351 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 MRI1Q9BV20 369 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 ABHD6Q9BV23 337 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 B3GAT1Q9P2W7 334 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 EML6Q6ZMW3 1958 aa13.39□□□□□ -0.27
CBX3-202ENST00000396386 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 ZDBF2Q9HCK1 2354 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 SLC43A1O75387 559 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 MLF1P58340 268 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 PLET1Q6UQ28 207 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 C6orf15Q6UXA7 325 aaPredicted RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 STAC2Q6ZMT1 411 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 RPS19BP1Q86WX3 136 aaKnown RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 WDFY1Q8IWB7 410 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 UBE2J2Q8N2K1 259 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 TMEM156Q8N614 296 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 THAP7Q9BT49 309 aaPredicted RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 RNF121Q9H920 327 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 RYDENQ9NUL5 291 aaKnown RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 RABL2BQ9UNT1 228 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 HDGFL3Q9Y3E1 203 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 PCDHGA9Q9Y5G4 932 aaKnown RBP13.38□□□□□ -0.27
CBX3-202ENST00000396386 A0A1B0GVC2 190 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 A0A1W2PNR3 127 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 MEIOCA2RUB1 952 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 A6NIN4 97 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 MPZL1O95297 269 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 WNT11O96014 354 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 CCL3P10147 92 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 TEX30Q5JUR7 227 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 PPP1R32Q7Z5V6 425 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 NOXO1Q8NFA2 376 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 OR10AC1Q8NH08 325 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 CT55Q8WUE5 264 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 TMEM106AQ96A25 262 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 HPF1Q9NWY4 346 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 ANKRD10Q9NXR5 420 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
CBX3-202ENST00000396386 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
CBX3-202ENST00000396386 AQP8O94778 261 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 HRGP04196 525 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 LIFP15018 202 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 OTX2P32243 289 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 SFTPDP35247 375 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 RPS18P62269 152 aaKnown RBP13.37□□□□□ -0.27
CBX3-202ENST00000396386 FOXK1P85037 733 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
CBX3-202ENST00000396386 PCK2Q16822 640 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 ODF4Q2M2E3 257 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 RSBN1Q5VWQ0 802 aaPredicted RBP13.37□□□□□ -0.27
CBX3-202ENST00000396386 LRRTM1Q86UE6 522 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 ARMC10Q8N2F6 343 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
CBX3-202ENST00000396386 FAM122AQ96E09 287 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 ABHD1Q96SE0 405 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 DDA1Q9BW61 102 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 PISDQ9UG56 409 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 TCFL5Q9UL49 500 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 CAMK2AQ9UQM7 478 aa13.37□□□□□ -0.27
CBX3-202ENST00000396386 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 TRABD2BA6NFA1 517 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ANXA2P2A6NMY6 339 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 CCNKO75909 580 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 OPN1LWP04000 364 aa13.36□□□□□ -0.27
CBX3-202ENST00000396386 ANXA2P07355 339 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms