RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 THADAQ6YHU6 1953 aa18.64■□□□□ 0.58
CLK3-202ENST00000395066 F5H5P2 479 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 PRAMEF26H0Y7S4 382 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 ICOSLGO75144 302 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 WNT11O96014 354 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 GUSBP08236 651 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 PNMTP11086 282 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 CCKBRP32239 447 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 OR1D4P47884 311 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 OR7E24Q6IFN5 339 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 DNM1P46Q6ZS02 220 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 MDGA2Q7Z553 956 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 ZNF454Q8N9F8 522 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 PTPMT1Q8WUK0 201 aaPredicted RBP18.64■□□□□ 0.57
CLK3-202ENST00000395066 MYEF2Q9P2K5 600 aaKnown RBP18.64■□□□□ 0.57
CLK3-202ENST00000395066 GOSR2O14653 212 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 RBBP9O75884 186 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 CSRP1P21291 193 aaKnown RBP18.64■□□□□ 0.57
CLK3-202ENST00000395066 ETFDHQ16134 617 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 ZNF227Q86WZ6 799 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 PLPP7Q8NBV4 271 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 OR2AK2Q8NG84 335 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 TGM7Q96PF1 710 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 EXOSC3Q9NQT5 275 aaKnown RBP18.64■□□□□ 0.57
CLK3-202ENST00000395066 GPR160Q9UJ42 338 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 MOKQ9UQ07 419 aa18.64■□□□□ 0.57
CLK3-202ENST00000395066 TRAV18A0A075B6X5 111 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 OR5K4A6NMS3 321 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 HCRTR2O43614 444 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 NSA2O95478 260 aaKnown RBP18.63■□□□□ 0.57
CLK3-202ENST00000395066 NUDT14O95848 222 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 MAPK3P27361 379 aaPredicted RBP18.63■□□□□ 0.57
CLK3-202ENST00000395066 MEP1BQ16820 701 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 DCAF12L2Q5VW00 463 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 ZNF660Q6AZW8 331 aaPredicted RBP18.63■□□□□ 0.57
CLK3-202ENST00000395066 Q6ZS52 159 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 CDH26Q8IXH8 852 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 OR5M9Q8NGP3 310 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 INTS14Q96SY0 518 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 CHST6Q9GZX3 395 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 COMMD4Q9H0A8 199 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 S1PR5Q9H228 398 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 WBP1LQ9NX94 342 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 STEAP1Q9UHE8 339 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 SMAD9O15198 467 aaKnown RBP18.63■□□□□ 0.57
CLK3-202ENST00000395066 ZNF254O75437 659 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 CTAG2O75638 210 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 PNPP00491 289 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 POU3F4P49335 361 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 SLC37A1P57057 533 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 ZNF117Q03924 483 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 MELKQ14680 651 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 UBXN2BQ14CS0 331 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 PRSS58Q8IYP2 241 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 OR51S1Q8NGJ8 323 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 ELOVL3Q9HB03 270 aa18.63■□□□□ 0.57
CLK3-202ENST00000395066 TRBV5-7A0A0A0MS05 114 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 IGHV5-51A0A0C4DH38 117 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 D6RAR5 112 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 H7C417 338 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 SDC3O75056 442 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 CD1CP29017 333 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 FNTBP49356 437 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 GMFBP60983 142 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 SQSTM1Q13501 440 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 ASPHD2Q6ICH7 369 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 TMEM184AQ6ZMB5 413 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 MUC20Q8N307 709 aaPredicted RBP18.62■□□□□ 0.57
CLK3-202ENST00000395066 EIF4E3Q8N5X7 224 aaKnown RBP18.62■□□□□ 0.57
CLK3-202ENST00000395066 FAM174AQ8TBP5 190 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 GPR148Q8TDV2 347 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 MTFP1Q9UDX5 166 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 GGT3PA6NGU5 568 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 XRCC3O43542 346 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 EEF1A1P5Q5VTE0 462 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 NKAIN2Q5VXU1 208 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 MARCH3Q86UD3 253 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 CDCA3Q99618 268 aaPredicted RBP18.62■□□□□ 0.57
CLK3-202ENST00000395066 HRH3Q9Y5N1 445 aa18.62■□□□□ 0.57
CLK3-202ENST00000395066 AQP8O94778 261 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 RENP00797 406 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 GTF2F2P13984 249 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 ZNF440Q8IYI8 595 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 C4orf45Q96LM5 186 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 PRODH2Q9UF12 536 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 FREM3P0C091 2139 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 TMEM131Q92545 1883 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 SRPX2O60687 465 aaPredicted RBP18.61■□□□□ 0.57
CLK3-202ENST00000395066 TPPPO94811 219 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 SPDEFO95238 335 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 WDPCPO95876 746 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 EFNA3P52797 238 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 FOXL2P58012 376 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 TNFAIP8L1Q8WVP5 186 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 TMEM138Q9NPI0 162 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 IFT46Q9NQC8 304 aa18.61■□□□□ 0.57
CLK3-202ENST00000395066 CD3DP04234 171 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 SPARCP09486 303 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 CSF1P09603 554 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms