RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 WBP1Q96G27 269 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 TCTN2Q96GX1 697 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 CD207Q9UJ71 328 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 COL4A2P08572 1712 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 TSPAN4O14817 238 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 TMEM127O75204 238 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 NMBP08949 121 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 AKAIN1P0CW23 69 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 SORDQ00796 357 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 MFGE8Q08431 387 aaPredicted RBP12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 PRAMEF17Q5VTA0 474 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 TTLL10Q6ZVT0 673 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 TMED4Q7Z7H5 227 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 RLN3Q8WXF3 142 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
GAPVD1-205ENST00000394084 IGHV5-51A0A0C4DH38 117 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 PPICP45877 212 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 MECP2P51608 486 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 ZP2Q05996 745 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 ACKR1Q16570 336 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 EMC4Q5J8M3 183 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TMEM205Q6UW68 189 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 NDUFAF7Q7L592 441 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 OR8B4Q96RC9 309 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 CCNL2Q96S94 520 aaPredicted RBP12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC38A3Q99624 504 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 B9D1Q9UPM9 204 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 KCNMB2Q9Y691 235 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 RP1P56715 2156 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 M0QYG6 137 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 CDC40O60508 579 aaKnown RBP eCLIP12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 LPLP06858 475 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 KRT77Q7Z794 578 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 STK35Q8TDR2 534 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TAS2R8Q9NYW2 309 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 TRIOO75962 3097 aa12.58□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC25A12O75746 678 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 BGLAPP02818 100 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 CAPZBP47756 277 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 ADAM8P78325 824 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 SERTAD2Q14140 314 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 KIAA0895LQ68EN5 471 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 OR10K2Q6IF99 312 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 STEAP1BQ6NZ63 245 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 TSSK4Q6SA08 328 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 PRSS42Q7Z5A4 293 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 KDM8Q8N371 416 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 ADAMTS18Q8TE60 1221 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 KLHDC7BQ96G42 594 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 APMAPQ9HDC9 416 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 TAS2R4Q9NYW5 299 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 PLCL2Q9UPR0 1127 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 DHDHQ9UQ10 334 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 LOC100289279A0A1B0GTE1 492 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 TCRBV16S1A1N1A0A5B0 115 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 DCDC2BA2VCK2 349 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 SPDEFO95238 335 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 MPZL1O95297 269 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 IL12BP29460 328 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 CSF2RBP32927 897 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 RORAP35398 523 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 Q6ZS52 159 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 HDDC2Q7Z4H3 204 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 OR1J4Q8NGS1 313 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 DMRTA2Q96SC8 542 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 ADAM19Q9H013 955 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 S1PR5Q9H228 398 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 POFUT1Q9H488 388 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 MRPL22Q9NWU5 206 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 DHCR7Q9UBM7 475 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 MFSD2BA6NFX1 497 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 SLC17A2O00624 439 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 CSN2P05814 226 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 FREM3P0C091 2139 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 CTLA4P16410 223 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 ATF4P18848 351 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 INSM1Q01101 510 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 BTN1A1Q13410 526 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 B3GNTL1Q67FW5 361 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 OR11A1Q9GZK7 315 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 LANCL2Q9NS86 450 aa12.57□□□□□ -0.4
GAPVD1-205ENST00000394084 SDK1Q7Z5N4 2213 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 PCDH15Q96QU1 1955 aa12.56□□□□□ -0.4
GAPVD1-205ENST00000394084 BLACEA4D250 179 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms