RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KLHDC9Q8NEP7 349 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 PPP1R1CQ8WVI7 109 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SAT2Q96F10 170 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 FAM46AQ96IP4 442 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ACTRT3Q9BYD9 372 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 PLEKHA1Q9HB21 404 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 OR2S2Q9NQN1 319 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 MRPL17Q9NRX2 175 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 NDOR1Q9UHB4 597 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ICKQ9UPZ9 632 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 WIF1Q9Y5W5 379 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 MBLAC1A4D2B0 266 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 C17orf105B2RV13 164 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 TMEM229AB2RXF0 380 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 INSIG1O15503 277 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 LDB2O43679 373 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 AIFM1O95831 613 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CD8AP01732 235 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PTHLHP12272 177 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PGAM2P15259 253 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 GZMHP20718 246 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 GAS1P54826 345 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 UBE2KP61086 200 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 DUSP8Q13202 625 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SCARB2Q14108 478 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CEACAM19Q7Z692 300 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 MCEMP1Q8IX19 187 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CMTM1Q8IZ96 169 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ASB17Q8WXJ9 295 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PHB2Q99623 299 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 C1QTNF3Q9BXJ4 246 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 MARCH5Q9NX47 278 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 IL36AQ9UHA7 158 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 HS3ST3B1Q9Y662 390 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CKAP5Q14008 2032 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 TRBV4-1A0A0J9YWV2 114 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SERTM1A2A2V5 107 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PRAMEF25A6NGN4 478 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 VSTM5A8MXK1 200 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 MAN2B1O00754 1011 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 GEMIN2O14893 280 aaKnown RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 COCHO43405 550 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 NR2F1P10589 423 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 AKT2P31751 481 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 IGFALSP35858 605 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SCAPQ12770 1279 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 IQCJQ1A5X6 159 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 GRHL2Q6ISB3 625 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 VRK2Q86Y07 508 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CMTM4Q8IZR5 234 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SKA2Q8WVK7 121 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 KCTD13Q8WZ19 329 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 MUCL1Q96DR8 90 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SLC25A38Q96DW6 304 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SYT3Q9BQG1 590 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 OR10A5Q9H207 317 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PLSCR2Q9NRY7 297 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 GPR52Q9Y2T5 361 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 LOC102724200A0A096LPH7 203 aaPredicted RBP8.53□□□□□ -1.04
PTPRA-204ENST00000380393 MANBAO00462 879 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 PRODHO43272 600 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ID4P47928 161 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 LIMS1P48059 325 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 STC1P52823 247 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 IHHQ14623 411 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 VWA2Q5GFL6 755 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ARL9Q6T311 187 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 TMED4Q7Z7H5 227 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF485Q8NCK3 441 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 LGALS14Q8TCE9 139 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 Q8WTZ3 238 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 OR8B4Q96RC9 309 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 EBPLQ9BY08 206 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ARV1Q9H2C2 271 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 HAO2Q9NYQ3 351 aa8.53□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF236Q9UL36 1845 aa8.52□□□□□ -1.04
PTPRA-204ENST00000380393 ANKUB1A6NFN9 424 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF727A8MUV8 499 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 PQBP1O60828 265 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 TK1P04183 234 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ACAA2P42765 397 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 XCR1P46094 333 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ATXN7L2Q5T6C5 722 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 SYT9Q86SS6 491 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 SCN4BQ8IWT1 228 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 LRRC56Q8IYG6 542 aaPredicted RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 SELENOHQ8IZQ5 122 aaKnown RBP8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ARRDC2Q8TBH0 407 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ECHDC3Q96DC8 303 aa8.52□□□□□ -1.05
PTPRA-204ENST00000380393 ABRACLQ9P1F3 81 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms