RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ADAT1Q9BUB4 502 aaKnown RBP7.17□□□□□ -1.26
USP48-203ENST00000374732 PPDPFQ9H3Y8 114 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 DHX35Q9H5Z1 703 aaKnown RBP7.17□□□□□ -1.26
USP48-203ENST00000374732 CISHQ9NSE2 258 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 SLC25A13Q9UJS0 675 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 SLC35A3Q9Y2D2 325 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 YIPF1Q9Y548 306 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 FEZF1A0PJY2 475 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 ANKUB1A6NFN9 424 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 FAM90A27PA6NNH2 459 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 ANKRD30BLA7E2S9 258 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 ADM5C9JUS6 153 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 E7ENX8 843 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 MFSD11O43934 449 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 TSPAN8P19075 237 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 GGT2P36268 569 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 TNFSF9P41273 254 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 MLLT11Q13015 90 aaPredicted RBP7.17□□□□□ -1.26
USP48-203ENST00000374732 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 C9orf135Q5VTT2 229 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 RTL6Q6ICC9 239 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 PAQR9Q6ZVX9 377 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 COMMD2Q86X83 199 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 ARIH2OSQ8N7S6 290 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 COQ10AQ96MF6 247 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 APOL4Q9BPW4 351 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 FICDQ9BVA6 458 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 ELOVL3Q9HB03 270 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 GALNT9Q9HCQ5 603 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 Q9N2K0 584 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 TXNRD2Q9NNW7 524 aa7.17□□□□□ -1.26
USP48-203ENST00000374732 TBC1D3EA0A087X179 549 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 ZNF587BE7ETH6 402 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 LEFTY2O00292 366 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 CDC40O60508 579 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP48-203ENST00000374732 S1PR4O95977 384 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 CFDP00746 253 aaPredicted RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 OR56A5P0C7T3 313 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 PSMB4P28070 264 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 NPBWR2P48146 333 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 CDC42P60953 191 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 GNG3P63215 75 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 ADORA2A-AS1P86434 159 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 DOC2BQ14184 412 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FCN2Q15485 313 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 CASP12Q6UXS9 341 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 Q6ZPB1 254 aaPredicted RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 SLC22A15Q8IZD6 547 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 SLC5A8Q8N695 610 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 TMEM251Q8N6I4 163 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 OR1P1Q8NH06 330 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 C1orf54Q8WWF1 131 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 YIPF6Q96EC8 236 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 RDH12Q96NR8 316 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 MS4A8Q9BY19 250 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 SPRTNQ9H040 489 aaPredicted RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 SLC28A3Q9HAS3 691 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 SLC2A4RGQ9NR83 387 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 SAMD4AQ9UPU9 718 aaKnown RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 ISM1B1AKI9 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 UBFD1O14562 309 aaKnown RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 ANXA9O76027 345 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 GLSO94925 669 aaPredicted RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 YIF1AO95070 293 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 SERPINA7P05543 415 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 ARSAP15289 507 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 CAMPP49913 170 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 PAX9P55771 341 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 FOXE3Q13461 319 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 C6orf136Q5SQH8 315 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 DNAJC24Q6P3W2 148 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 TEX38Q6PEX7 206 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 OLIG3Q7RTU3 272 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 NUFIP2Q7Z417 695 aaKnown RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 OR4D5Q8NGN0 318 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 OR2AE1Q8NHA4 323 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 HOXB13Q92826 284 aaPredicted RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 EMG1Q92979 244 aaKnown RBP7.16□□□□□ -1.26
USP48-203ENST00000374732 VSTM2LQ96N03 204 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 MUS81Q96NY9 551 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 RNF122Q9H9V4 155 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 HHLA2Q9UM44 414 aa7.16□□□□□ -1.26
USP48-203ENST00000374732 TMEM89A2RUT3 159 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 DHRS7CA6NNS2 312 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 NPIPB9F8W1W9 429 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 MRASO14807 208 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 B4GALT3O60512 393 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 LALBAP00709 142 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 CD74P04233 296 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 BCHEP06276 602 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 DUX4L4P0CJ87 422 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 EPHA1P21709 976 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 CHRNB4P30926 498 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 CSF2RBP32927 897 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms